Gene
| Gene Model ID | pfu_aug2.0_448.1_27407 |
|---|---|
| Locus | scaffold448.1 : 84942 ... 87721 : + |
| To GenomeBrowser | scaffold448.1:84942..87721 |
| Genes list of scaffold | scaffold448.1 |
| Synonym | pfu_aug1.0_1789.1_29865 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_448.1_27407.t1 | 4 | 1 | OTU | 39 | 72 | 3.1e-14 | 53.5 | 2.0 | 15000.0 | -3.6 |
| pfu_aug2.0_448.1_27407.t1 | 4 | 2 | OTU | 229 | 261 | 3.1e-14 | 53.5 | 1.5 | 11000.0 | -3.1 |
| pfu_aug2.0_448.1_27407.t1 | 1 | 1 | Herpes_teg_N | 251 | 404 | 8.7e-12 | 44.8 | 2.9e-15 | 2.1e-11 | 43.5 |
| pfu_aug2.0_448.1_27407.t1 | 4 | 3 | OTU | 537 | 631 | 3.1e-14 | 53.5 | 4.2e-18 | 3.1e-14 | 53.5 |
| pfu_aug2.0_448.1_27407.t1 | 4 | 4 | OTU | 739 | 791 | 3.1e-14 | 53.5 | 2.0 | 15000.0 | -5.4 |
Transcript
| Transcript ID | pfu_aug2.0_448.1_27407.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_448.1_27407.t1 atgcgcagaaaagcaaatcgaagaagaaaagtcagctatagacaaaatactgacagcaatattgaagtaccaactgctat gacattaccagagcaacaaaacaaaggaaacaactcttctttgagaatgtcattgcagcagcagattgagaatcaaactt cttccaatggaaagaatttacccaaacaaaacattgaaaacaatgcctctgtgggactggcacctcctagagaggaaatt tccctggccgctcggaggttggcctctccttgtgagaaaacgcctctaaacgcccgggggttggcacctccctcgggaag ccgtctgagtgctacagatgttagcatgccaccgagccctgataccccagcgtgggtatgtaccccagcgcgggtaccct cgccaaagcgcggcgttgcaggtcagacgcaaactgggatgagagctcatttcatggcagtggaatgtagacccagtata attgaatcattgagaaaagatgcaaagaatattgaaacgaatactgaactgaactgtgaaacgaaccatgaaacgaatac tgaattgaactatggaacggatactacactggactatgaaactactactaaaccgaacaatggaactattttgcattcat tgcggtctttgccctcctattccatttcaaaagatctaagcaaaacaagaaaaaaggatagaaacgtaagcaaaaagcaa tgttctaatattacaaaggctatacaaggaagcatgcatcagggtagctacacgtttggtgaaaatgcaggcaatcaatg tgttccaatttgtttaatagcagggatttttcttactacgaagcctgtacatgtatggacttcagaagatatggacaata ttcttatgactgggaatgagctatattcatttctgagagcaagttcactcatgaatcataaccacttattggtacatgaa ctacctagacagattgaagttttctatacattttacaacattcacatcgatgaatctaaagtctccatgatatcgtctgt agaaaatcttaatcaagatctaaccaactttaatgctttgcctttagatgaggcaatacaactgtcattagaaaaatacc ctacagcatttgtttgctttgcaggcaacactatgctcataggtagaacagatttcggggttttcatctttgattctcat tcacggtctgagacaggaatgatcgatatcgatggtaaaagcacatgcttgcttatgacagatttaaaacatataagcga acgaatacatgccctaggagaatcaatgaatatatctggtgcaatcatgattgaaattactgggttcaaagttgaaaatg tgcattcctctagtgataaacatgaatcaaatgtacaacttcgctctcaaagagaaaatatcttagatgacgatgatgct gtaaagttttcattcaaggaagcacctatcaaacctgacttcaaattactttgcaaggggacacaaaaacaaatatgctc tactcatgatctgaagtacgaaaataataaagtacacggcaacaagctgattaaaaatgctgaagagccaaagacatggc acagaataaaaggcgatgggaattgcttctttcgagctctgtcatttgcactaagtaacacagaagagaatcatgtaaaa cttagagaacttgtctgtgaacacgcatcatcacaaccagatgtgtttactccaatattaagagtaggacatgagtcagt attatcttatttagaaacgacaaagatgagagaggattgtgtttgggctacagaattcgagatatttgtggcatctggta tgttagactgtaccatttacacctttaacaatgatacttggactaagtttgcaatgccttcagagaataaaagaaatata tctgataaaaataagatattcttggaccatgtcaatagtagtcactatgatgttgtcttgtctacaggatctgaaacggc gaaagataaaaataattcaaataggtttcaaggtctcagagaaatgcaacgaaagagaaaagacaccaaagaaagagatg tcctgagaaaacgcctgaaaaaacaggaagagttgatagatgaaaataacgataacgttagtggacttgacactccagaa atacatatagtgaaggacaactccgtcgacacaaatgtcgagaactccctcttagataacattcgaaagaactgtaaaag aaagttgcgatatatgaatgatgagacgtaccgtgacacaagaaagaaaatcagcaaacgaacatacgaggagaatgatg cctacaggggaaataagaaatcttcaaacatgaataagtacaaagaaaatatcgaacacagggaaaaactcaaagagaga agtgtcatgaagtacttgcataatgaagaacacaggaagcacgtcaaagaagcaagtgtttcaaaatatagagagaatga ggagcataaggagaaagtaaaattagcaagttttacaaagtacaaggaaaatgtgctatacaagaagaaaaaatag |
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Protein
| Protein ID | pfu_aug2.0_448.1_27407.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_448.1_27407.t1 MRRKANRRRKVSYRQNTDSNIEVPTAMTLPEQQNKGNNSSLRMSLQQQIENQTSSNGKNLPKQNIENNASVGLAPPREEI SLAARRLASPCEKTPLNARGLAPPSGSRLSATDVSMPPSPDTPAWVCTPARVPSPKRGVAGQTQTGMRAHFMAVECRPSI IESLRKDAKNIETNTELNCETNHETNTELNYGTDTTLDYETTTKPNNGTILHSLRSLPSYSISKDLSKTRKKDRNVSKKQ CSNITKAIQGSMHQGSYTFGENAGNQCVPICLIAGIFLTTKPVHVWTSEDMDNILMTGNELYSFLRASSLMNHNHLLVHE LPRQIEVFYTFYNIHIDESKVSMISSVENLNQDLTNFNALPLDEAIQLSLEKYPTAFVCFAGNTMLIGRTDFGVFIFDSH SRSETGMIDIDGKSTCLLMTDLKHISERIHALGESMNISGAIMIEITGFKVENVHSSSDKHESNVQLRSQRENILDDDDA VKFSFKEAPIKPDFKLLCKGTQKQICSTHDLKYENNKVHGNKLIKNAEEPKTWHRIKGDGNCFFRALSFALSNTEENHVK LRELVCEHASSQPDVFTPILRVGHESVLSYLETTKMREDCVWATEFEIFVASGMLDCTIYTFNNDTWTKFAMPSENKRNI SDKNKIFLDHVNSSHYDVVLSTGSETAKDKNNSNRFQGLREMQRKRKDTKERDVLRKRLKKQEELIDENNDNVSGLDTPE IHIVKDNSVDTNVENSLLDNIRKNCKRKLRYMNDETYRDTRKKISKRTYEENDAYRGNKKSSNMNKYKENIEHREKLKER SVMKYLHNEEHRKHVKEASVSKYRENEEHKEKVKLASFTKYKENVLYKKKK |
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