Gene
| Gene Model ID | pfu_aug2.0_448.1_27409 |
|---|---|
| Locus | scaffold448.1 : 111216 ... 113185 : - |
| To GenomeBrowser | scaffold448.1:111216..113185 |
| Genes list of scaffold | scaffold448.1 |
| Synonym | pfu_aug1.0_124.1_65238 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_448.1_27409.t1 | 1 | 1 | C1q | 65 | 183 | 7.0e-26 | 90.7 | 6.6e-30 | 9.7e-26 | 90.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_448.1_27409.t1 | gi|701407377|ref|XP_009997813.1| | PREDICTED: complement C1q tumor necrosis factor-related protein 4 [Chaetura pelagica] | 1.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_448.1_27409.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_448.1_27409.t1 atgccatacatgacaggttatcaccagggaagaacacatgaaaagttggatagactccttggaatcaaccaaaatgccat taatcaacagagaattttgtcccgacaggactttctcgaaaaactggtgaagaaacataaaaaagaaaatgacagaagat ttctacaaaagacagatgacgacaaagccattgcatttactgtatcatcatcatcccacttgactaatcatgacaaccag aaaattatctacgacatggtgatcacaaatacaggaaatacctacaacaaaactacaggtatatttacctgtcctgtctc aggtacatacgtttttacctggtctgtcatgtcaaagagtaccaaggaaatgtgtcatgcacatctccataacggtatca agaagatgatggcacacggctatgatagcggtcactacaaagcagccagtaataccatggtgctctcactaaacgtgggt gaacttgtgtggatagagacatctcatggtaaatactgctacggatatcccttcacgggattctctggctggaaattgta a |
|
Protein
| Protein ID | pfu_aug2.0_448.1_27409.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_448.1_27409.t1 MPYMTGYHQGRTHEKLDRLLGINQNAINQQRILSRQDFLEKLVKKHKKENDRRFLQKTDDDKAIAFTVSSSSHLTNHDNQ KIIYDMVITNTGNTYNKTTGIFTCPVSGTYVFTWSVMSKSTKEMCHAHLHNGIKKMMAHGYDSGHYKAASNTMVLSLNVG ELVWIETSHGKYCYGYPFTGFSGWKL |
|