Gene
| Gene Model ID | pfu_aug2.0_448.1_27412 |
|---|---|
| Locus | scaffold448.1 : 172152 ... 182897 : + |
| To GenomeBrowser | scaffold448.1:172152..182897 |
| Genes list of scaffold | scaffold448.1 |
| Synonym | pfu_aug1.0_931.1_29489 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_448.1_27412.t1 | 2 | 1 | V-set | 6 | 70 | 4.8e-12 | 45.7 | 1.1e-10 | 3.3e-07 | 30.1 |
| pfu_aug2.0_448.1_27412.t1 | 2 | 1 | ig | 7 | 63 | 1.8e-09 | 37.5 | 1.2e-05 | 0.035 | 14.2 |
| pfu_aug2.0_448.1_27412.t1 | 2 | 1 | I-set | 29 | 66 | 3.3e-12 | 46.1 | 1.6e-05 | 0.047 | 13.5 |
| pfu_aug2.0_448.1_27412.t1 | 2 | 1 | Ig_2 | 48 | 68 | 5.4e-09 | 36.0 | 0.0056 | 17.0 | 5.6 |
| pfu_aug2.0_448.1_27412.t1 | 2 | 2 | I-set | 91 | 171 | 3.3e-12 | 46.1 | 7.7e-11 | 2.3e-07 | 30.5 |
| pfu_aug2.0_448.1_27412.t1 | 2 | 2 | V-set | 91 | 167 | 4.8e-12 | 45.7 | 1.6e-05 | 0.048 | 13.5 |
| pfu_aug2.0_448.1_27412.t1 | 2 | 2 | Ig_2 | 91 | 166 | 5.4e-09 | 36.0 | 4.0e-10 | 1.2e-06 | 28.5 |
| pfu_aug2.0_448.1_27412.t1 | 2 | 2 | ig | 95 | 163 | 1.8e-09 | 37.5 | 7.7e-07 | 0.0023 | 18.0 |
Transcript
| Transcript ID | pfu_aug2.0_448.1_27412.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_448.1_27412.t1 atgagaagacaagcaaaaacctccgtttactggatgagaatgtccaagccaaatcctataacagtcggggagtatgtgta cagtccagacgatcgcttctctatacaacgaatacctgaactatttgaatggaatttaaaaataaaagacgttaaaaaag aagacgaagatgtatacttttgtgccgttagtgcgggcgagaaaagagaaaaatacagacagatggtacttcttagggta aaagccatatctataagtggtacagatttcgttacgaaaggcaaccccataaagctacaatgtaatgcgactggtgtgga atatgtacccgaaatattagactggtttaaagacggtaacatcgtcagcagacattacagtggtcatgtcaaaataacag actttaatctcgtggagaaaaagacattgattagcaaactttatatccgaaagagtaccatggaagacgccgggaactac atgtgccgcagcaccaacttggacattggtaaaataatggtccatgtcttagacggtacggtacttcggaagccgatcag tgccaacctaagtgaaaattttaagtcgttattacgacttggttatctcgtattagcgacttag |
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Protein
| Protein ID | pfu_aug2.0_448.1_27412.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_448.1_27412.t1 MRRQAKTSVYWMRMSKPNPITVGEYVYSPDDRFSIQRIPELFEWNLKIKDVKKEDEDVYFCAVSAGEKREKYRQMVLLRV KAISISGTDFVTKGNPIKLQCNATGVEYVPEILDWFKDGNIVSRHYSGHVKITDFNLVEKKTLISKLYIRKSTMEDAGNY MCRSTNLDIGKIMVHVLDGTVLRKPISANLSENFKSLLRLGYLVLAT |
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