Gene
| Gene Model ID | pfu_aug2.0_448.1_27414 |
|---|---|
| Locus | scaffold448.1 : 241952 ... 246647 : + |
| To GenomeBrowser | scaffold448.1:241952..246647 |
| Genes list of scaffold | scaffold448.1 |
| Synonym | pfu_aug1.0_931.1_29493 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_448.1_27414.t1 | 2 | 1 | TcdA_TcdB | 81 | 120 | 2.5e-06 | 26.2 | 5.3e-07 | 0.004 | 15.7 |
| pfu_aug2.0_448.1_27414.t1 | 2 | 1 | Gly_transf_sug | 93 | 175 | 2.0e-16 | 60.2 | 6.9e-20 | 5.1e-16 | 58.9 |
| pfu_aug2.0_448.1_27414.t1 | 2 | 2 | TcdA_TcdB | 146 | 165 | 2.5e-06 | 26.2 | 5.1e-06 | 0.038 | 12.4 |
| pfu_aug2.0_448.1_27414.t1 | 2 | 2 | Gly_transf_sug | 212 | 228 | 2.0e-16 | 60.2 | 1.3 | 9500.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_448.1_27414.t1 | gi|676477777|ref|XP_009061214.1| | hypothetical protein LOTGIDRAFT_234732 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_448.1_27414.t1 | gi|524893271|ref|XP_005103153.1| | PREDICTED: inositol phosphoceramide mannosyltransferase 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_448.1_27414.t1 | gi|676477774|ref|XP_009061213.1| | hypothetical protein LOTGIDRAFT_165932 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_448.1_27414.t1 | gi|32475986|ref|NP_868980.1| | 3.0e-39 | |
| pfu_aug2.0_448.1_27414.t1 | gi|575485452|ref|XP_006682020.1| | hypothetical protein BATDEDRAFT_37448 [Batrachochytrium dendrobatidis JAM81] | 4.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_448.1_27414.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_448.1_27414.t1 atgggaaatatcgtgaacaccatcatgaagctggtcttggctgttagccgtcctgatactctaagaacgttaggtgttgg tgcaatatttattacacttcttcatttcattatcaagtttgaacaagtgaaagagtatggagacttttacaatttgtaca ttcctatagaggaggaatttgttccgttaggtatatccagccccgaggacttcccaacaagtggaccttacagaattccg aagataattcaccaaacgtggaaaaataggaacatacccagtaagttctcaaaatgggtgaagtcatgggtgaaaaatca tccagactggcagtactatctatggacagatgacagtgctcgtaaactgatcagagaaagacaccctcatttactggatg tttttaatggctatgaggatggaatcagaagggctgattctctgaggtatattatactgtatgagtttggaggtgtgtat gcagacatggacatggagagtctaaagtctctggatccatttgcaaggaagtatgcatgttttctaggtcaggagccata cgaacatcccatcctggacgggggttatgaaggactggtcatcaatgccttgatggcatcacgtgcaaaacatccgtata tgaagcttctaatggaaaatctgcccaagtaccaaaatatgtggagtgtaatggacagtacaggaccacattttgtcact ttacatttcagagattttaacaagaaccaccctcagcccgcagatcatataaacggaacatacctagctccgtccgagta tttctttcctacagttgatccttcaaaatatttttggtttaatgcacaatgtggaaaatttatgaaattaaagcccattc agcagaaagcctgcaagtctttaaaagttaacaaattgaagaaaaagccattgtcattttcctatacagatcatcattgg gaacatacctatatagatttcagactttctttgaaaggtcctgttgatatcaaacacctagtcccacatgctgtaatata ctaa |
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Protein
| Protein ID | pfu_aug2.0_448.1_27414.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_448.1_27414.t1 MGNIVNTIMKLVLAVSRPDTLRTLGVGAIFITLLHFIIKFEQVKEYGDFYNLYIPIEEEFVPLGISSPEDFPTSGPYRIP KIIHQTWKNRNIPSKFSKWVKSWVKNHPDWQYYLWTDDSARKLIRERHPHLLDVFNGYEDGIRRADSLRYIILYEFGGVY ADMDMESLKSLDPFARKYACFLGQEPYEHPILDGGYEGLVINALMASRAKHPYMKLLMENLPKYQNMWSVMDSTGPHFVT LHFRDFNKNHPQPADHINGTYLAPSEYFFPTVDPSKYFWFNAQCGKFMKLKPIQQKACKSLKVNKLKKKPLSFSYTDHHW EHTYIDFRLSLKGPVDIKHLVPHAVIY |
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