Gene
| Gene Model ID | pfu_aug2.0_450.1_00752 |
|---|---|
| Locus | scaffold450.1 : 10223 ... 15631 : + |
| To GenomeBrowser | scaffold450.1:10223..15631 |
| Genes list of scaffold | scaffold450.1 |
| Synonym | pfu_aug1.0_7670.1_38621 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_450.1_00752.t1 | 1 | 1 | Sarcoglycan_2 | 24 | 127 | 1.6e-07 | 30.0 | 7.8e-11 | 1.9e-07 | 29.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_450.1_00752.t1 | gi|676462530|ref|XP_009056298.1| | hypothetical protein LOTGIDRAFT_232831 [Lottia gigantea] | 2.0e-23 |
| pfu_aug2.0_450.1_00752.t1 | gi|524868628|ref|XP_005091115.1| | PREDICTED: uncharacterized protein LOC101854772 isoform X4 [Aplysia californica] | 4.0e-16 |
| pfu_aug2.0_450.1_00752.t1 | gi|524868626|ref|XP_005091114.1| | PREDICTED: uncharacterized protein LOC101854772 isoform X3 [Aplysia californica] | 5.0e-16 |
| pfu_aug2.0_450.1_00752.t1 | gi|524868624|ref|XP_005091113.1| | PREDICTED: uncharacterized protein LOC101854772 isoform X2 [Aplysia californica] | 7.0e-16 |
| pfu_aug2.0_450.1_00752.t1 | gi|524868622|ref|XP_005091112.1| | PREDICTED: uncharacterized protein LOC101854772 isoform X1 [Aplysia californica] | 8.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_450.1_00752.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_450.1_00752.t1 atggataatgaaggatacctatggataggtgagatggagaacgagttctctccgccacccctgtgtatagacagccattg tcgtgacatgtttatggaactgatatatattgtagccgtaccagggggaataactctgctaacagtgctgattgtaggga tctgtatgttctgctgcggaaataaaagcaggacttcagaagcagaggatgatgaaattgagttggataagtactacaca attcgtcgagcctcccagagtttgagagatttgtcacacaagcgagatactgtcctgttatcaagtcgtagtgggtcgct atcgtattccgactctgacagataccgacatagtgctagaggtggtagaggcaataccagctactcagctccaagtactc tacagagggaacgtaggagacatagagagagtgagaggagtgcatcacatgacaggagtgtatccccctccccataccat caagtaccagggagtgggggaaggagtgtcactcctccttaccagtatgttccctctgaacagatcagccttggtgtggg agacagattgttgcctccaagtaacaactccaatggtctacatgatcagcaggctctcctctcacacagtggtagctag |
|
Protein
| Protein ID | pfu_aug2.0_450.1_00752.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_450.1_00752.t1 MDNEGYLWIGEMENEFSPPPLCIDSHCRDMFMELIYIVAVPGGITLLTVLIVGICMFCCGNKSRTSEAEDDEIELDKYYT IRRASQSLRDLSHKRDTVLLSSRSGSLSYSDSDRYRHSARGGRGNTSYSAPSTLQRERRRHRESERSASHDRSVSPSPYH QVPGSGGRSVTPPYQYVPSEQISLGVGDRLLPPSNNSNGLHDQQALLSHSGS |
|