Gene
| Gene Model ID | pfu_aug2.0_450.1_00757 |
|---|---|
| Locus | scaffold450.1 : 225002 ... 226710 : - |
| To GenomeBrowser | scaffold450.1:225002..226710 |
| Genes list of scaffold | scaffold450.1 |
| Synonym | pfu_aug1.0_5630.1_09179 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_450.1_00757.t1 | 2 | 1 | Ank_2 | 5 | 35 | 3.2e-16 | 59.4 | 6.4e-08 | 0.00019 | 21.7 |
| pfu_aug2.0_450.1_00757.t1 | 3 | 1 | Ank | 6 | 35 | 6.5e-11 | 41.4 | 5.4e-10 | 1.6e-06 | 27.6 |
| pfu_aug2.0_450.1_00757.t1 | 2 | 1 | Ank_4 | 6 | 39 | 2.9e-08 | 33.9 | 2.1e-07 | 0.00062 | 20.2 |
| pfu_aug2.0_450.1_00757.t1 | 2 | 1 | Ank_5 | 6 | 35 | 5.7e-08 | 32.7 | 2.0e-06 | 0.006 | 16.7 |
| pfu_aug2.0_450.1_00757.t1 | 3 | 1 | Ank_3 | 6 | 32 | 2.9e-07 | 30.0 | 4.3e-06 | 0.013 | 15.7 |
| pfu_aug2.0_450.1_00757.t1 | 2 | 2 | Ank_2 | 9 | 101 | 3.2e-16 | 59.4 | 2.3e-14 | 6.9e-11 | 42.3 |
| pfu_aug2.0_450.1_00757.t1 | 3 | 2 | Ank_3 | 45 | 78 | 2.9e-07 | 30.0 | 0.012 | 35.0 | 5.0 |
| pfu_aug2.0_450.1_00757.t1 | 3 | 2 | Ank | 63 | 81 | 6.5e-11 | 41.4 | 0.00048 | 1.4 | 8.8 |
| pfu_aug2.0_450.1_00757.t1 | 2 | 2 | Ank_5 | 63 | 89 | 5.7e-08 | 32.7 | 2.2e-05 | 0.066 | 13.4 |
| pfu_aug2.0_450.1_00757.t1 | 2 | 2 | Ank_4 | 67 | 101 | 2.9e-08 | 33.9 | 8.7e-05 | 0.26 | 11.8 |
| pfu_aug2.0_450.1_00757.t1 | 3 | 3 | Ank | 83 | 111 | 6.5e-11 | 41.4 | 0.13 | 380.0 | 1.1 |
| pfu_aug2.0_450.1_00757.t1 | 3 | 3 | Ank_3 | 83 | 113 | 2.9e-07 | 30.0 | 0.0091 | 27.0 | 5.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_450.1_00757.t1 | gi|665806335|ref|XP_008551404.1| | PREDICTED: nuclear factor NF-kappa-B p100 subunit isoform X2 [Microplitis demolitor] | 3.0e-07 |
| pfu_aug2.0_450.1_00757.t1 | gi|665806333|ref|XP_008551403.1| | PREDICTED: nuclear factor NF-kappa-B p100 subunit isoform X1 [Microplitis demolitor] | 3.0e-07 |
| pfu_aug2.0_450.1_00757.t1 | gi|242799588|ref|XP_002483412.1| | ankyrin repeat-rich membrane-spanning protein, putative [Talaromyces stipitatus ATCC 10500] | 4.0e-07 |
| pfu_aug2.0_450.1_00757.t1 | gi|123429531|ref|XP_001307718.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 2.0e-06 |
| pfu_aug2.0_450.1_00757.t1 | gi|479197912|ref|YP_007827138.1| | 3.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_450.1_00757.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_450.1_00757.t1 atggaatattttgaaatgaccccattatactctgctgtcatgatggtgtcaccagaaattgtgcagctgctgctaaatgc cggagctgatccaaacgatacagatttatccggaatggaaatgggaagttacagatgcagtctgttacatacagcacaaa tgctgaaagagagttcctttgagaagtcgagtacaattcttcaaatgctgatagaagcaggtgcccgtctgaaccaggag gacagttacggctatacaccaatacaacactgtataaagaggtgtaaaacaaaagcctttaacatgacaaatcttattct acttatcgaagcaggaccgaaactggagtctgtggagcgtcatcagcttggagtcttcattgtatttgctgcagtgttac cgtcagtgggacattatcagactcctagtggacgccggatgggagctacaccaggaaccctgtatggacaatgtactaga gaacgcccaggaacgcaacactga |
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Protein
| Protein ID | pfu_aug2.0_450.1_00757.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_450.1_00757.t1 MEYFEMTPLYSAVMMVSPEIVQLLLNAGADPNDTDLSGMEMGSYRCSLLHTAQMLKESSFEKSSTILQMLIEAGARLNQE DSYGYTPIQHCIKRCKTKAFNMTNLILLIEAGPKLESVERHQLGVFIVFAAVLPSVGHYQTPSGRRMGATPGTLYGQCTR ERPGTQH |
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