Gene
| Gene Model ID | pfu_aug2.0_450.1_00761 |
|---|---|
| Locus | scaffold450.1 : 262101 ... 266693 : + |
| To GenomeBrowser | scaffold450.1:262101..266693 |
| Genes list of scaffold | scaffold450.1 |
| Synonym | pfu_aug1.0_52493.1_70752 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_450.1_00761.t1 | 2 | 1 | GFA | 41 | 43 | 7.8e-10 | 38.5 | 2.0 | 15000.0 | -4.5 |
| pfu_aug2.0_450.1_00761.t1 | 2 | 2 | GFA | 60 | 133 | 7.8e-10 | 38.5 | 1.1e-13 | 7.8e-10 | 38.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_450.1_00761.t1 | gi|198428363|ref|XP_002130065.1| | PREDICTED: centromere protein V-like [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_450.1_00761.t1 | gi|340380388|ref|XP_003388704.1| | PREDICTED: centromere protein V-like [Amphimedon queenslandica] | 0.0 |
| pfu_aug2.0_450.1_00761.t1 | gi|620952854|ref|XP_001509162.2| | PREDICTED: centromere protein V [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_450.1_00761.t1 | gi|632957763|ref|XP_007894663.1| | PREDICTED: centromere protein V isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_450.1_00761.t1 | gi|505845759|ref|XP_004616359.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_450.1_00761.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_450.1_00761.t1 atgtacagtacacgtaataaccatcgacacaaacaaccccgttcaagcaaacaggcaggattgttcaggaaatatagaat catgtcgtcaggggaagatgtagttttacaccgaggtgggtgccattgtggcgctgtcagatttgaagtgtgggcgccaa gacgtctccgtgtggtagaatgcaactgttctatatgctacataaagaaaaacgaccatttcattgtccctaaatccaga ttcaagctactgaagggagaggagcatctgaccatctacacattcaatacgggcaaagcccagcatactttttgtaaggt gtgcggagttcagagtttttacacaccaagaagtaaccaagatggatacggtgtgaatccgcgttgccttgacgacggta cagtggaaggaatagactgggaaacatttgatggtcaaaactgggaaaagacatttgcgacctctgatatcagactgaga tccaaggagtga |
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Protein
| Protein ID | pfu_aug2.0_450.1_00761.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_450.1_00761.t1 MYSTRNNHRHKQPRSSKQAGLFRKYRIMSSGEDVVLHRGGCHCGAVRFEVWAPRRLRVVECNCSICYIKKNDHFIVPKSR FKLLKGEEHLTIYTFNTGKAQHTFCKVCGVQSFYTPRSNQDGYGVNPRCLDDGTVEGIDWETFDGQNWEKTFATSDIRLR SKE |
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