Gene
| Gene Model ID | pfu_aug2.0_450.1_00762 |
|---|---|
| Locus | scaffold450.1 : 267950 ... 289090 : - |
| To GenomeBrowser | scaffold450.1:267950..289090 |
| Genes list of scaffold | scaffold450.1 |
| Synonym | pfu_aug1.0_7718.1_45718 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_450.1_00762.t3 | 2 | 1 | Hormone_recep | 85 | 119 | 3.6e-14 | 52.3 | 0.11 | 810.0 | -1.1 |
| pfu_aug2.0_450.1_00762.t3 | 1 | 1 | zf-C4 | 140 | 209 | 1.3e-26 | 92.6 | 3.8e-30 | 2.8e-26 | 91.5 |
| pfu_aug2.0_450.1_00762.t3 | 2 | 2 | Hormone_recep | 331 | 442 | 3.6e-14 | 52.3 | 4.8e-18 | 3.6e-14 | 52.3 |
Transcript
| Transcript ID | pfu_aug2.0_450.1_00762.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_450.1_00762.t1 atgtcaatgctggggatggaaaaacttgtgaacgagaatgatttcacggagaaggttcatcttagagagagcagtaatac gaggcaacctgccatggctgaaaattcaccagactcaggactggagagcttctctcccttaagtgatccttacattccaa gaaatataaagaaagaagccgtgagtgaatacatggacagtgagagtttttaccaacatagctcgggtgacgacataaca aatagtcccgagagtggtatagacattggtgctgactatgacagaaagaaacagagtgatgacactgtcccgttctcaaa ctactcaactgaacattctcagagaatgcaggaaatatcacagatgagtaagagtgagtttgatagaaatccagatatca ggagtacagtacccttacttcccccgtgtagagtatgtggtgagaaagcttcaggtttccattatggtgtcaacacttgt gaagcatgtaaggggttcttcaggagaagcctcaggaggaagtgtgattataaatgtgtgactggagagaaacagtgtgt gatagagcctgggagaaggaatagctgtccacaatgtcgttacttaaagtgtctcactgtcggcatgtcaaaagaagcca taaaaacgggtagatacactcatgagaagcgtactcaagatatcagagagataaagagactacagtgtggggatgtcgtc aaagaagaacctatagaagaactgcctcatcctaatccatttcctagtgatgagctggaccatttgattggtctggtgga taagagtcatgtagaaatgtatggtccactctacaagttctggattgataaggaatcaatcaaaagaaggactgaagctt atgcagaagaattcagaattcagtctgagatgtttggtttgcatggtgtatcgaaggaagaattcaaaactttctacaat caaacgggaattgatgtagataataggatagaactggtcagcaactttgctaatacgatggaaagaggtgttcaaaaatt tatcaccttcgctaagaccatccctggtttcagtaaactcaacctggaggaccaagcaagtctagtgaagtcatccaggt ttgaattttggatctttggcttcttcaagtttgtgaacacacaagccaatgttactacaagtttactgggaagatgttat catataaacgagttgtgtaaactatgggatgaagaatttatgaaaggcctcttcaagttttgtgggactttacaggagct tcacctgacagacacagagatatcacttatcagatgtgtttgccttatgtcaagagccaatcagaatcttcgtttcttga aaatgacaatggaaattaaatga |
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| Transcript ID | pfu_aug2.0_450.1_00762.t2 |
| Definition | - |
>pfu_aug2.0_450.1_00762.t2 atgtcaatgctggggatggaaaaacttgtgaacgagaatgatttcacggagaaggttcatcttagagagagcagtaatac gaggcaacctgccatggctgaaaattcaccagactcaggactggagagcttctctcccttaagtgatccttacattccaa gaaatataaagaaagaagccgtgagtgaatacatggacagtgagagtttttaccaacatagctcgggtgacgacataaca aatagtcccgagagtggtatagacattggtgctgactatgacagaaagaaacagagtgatgacactgtcccgttctcaaa ctactcaactgaacattctcagagaatgcaggaaatatcacagatgagtaagagtgagtttgatagaaatccagatatca ggagtacagtacccttacttcccccgtgtagagtatgtggtgagaaagcttcaggtttccattatggtgtcaacacttgt gaagcatgtaaggggttcttcaggagaagcctcaggaggaagtgtgattataaatgtgtgactggagagaaacagtgtgt gatagagcctgggagaaggaatagctgtccacaatgtcgttacttaaagtgtctcactgtcggcatgtcaaaagaagcca taaaaacgggtagatacactcatgagaagcgtactcaagatatcagagagataaagagactacagtgtggggatgtcgtc aaagaagaacctatagaagaactgcctcatcctaatccatttcctagtgatgagctggaccatttgattggtctggtgga taagagtcatgtagaaatgtatggtccactctacaagttctggattgataaggaatcaatcaaaagaaggactgaagctt atgcagaagaattcagaattcagtctgagatgtttggtttgcatggtgtatcgaaggaagaattcaaaactttctacaat caaacgggaattgatgtagataataggatagaactggtcagcaactttgctaatacgatggaaagaggtgttcaaaaatt tatcaccttcgctaagaccatccctggtttcagtaaactcaacctggaggaccaagcaagtctagtgaagtcatccaggt ttgaattttggatctttggcttcttcaagtttgtgaacacacaagccaatgttactacaagtttactgggaagatgttat catataaacgagttgtgtaaactatgggatgaagaatttatgaaaggcctcttcaagttttgtgggactttacaggagct tcacctgacagacacagagatatcacttatcagatgtgtttgccttatgtcaagaggatattgttgttcagtgtacttag ctaagccttag |
|
| Transcript ID | pfu_aug2.0_450.1_00762.t3 |
| Definition | - |
>pfu_aug2.0_450.1_00762.t3 atgctggggatggaaaaacttgtgaacgagaatgatttcacggagaaggttcatcttagagagagcagtaatacgaggca acctgccatggctgaaaattcaccagactcaggactggagagcttctctcccttaagtgatccttacattccaagaaata taaagaaagaagccgtgagtgaatacatggacagtgagagtttttaccaacatagctcgggtgacgacataacaaatagt cccgagagtggtatagacattggtgctgactatgacagaaagaaacagagtgatgacactgtcccgttctcaaactactc aactgaacattctcagagaatgcaggaaatatcacagatgagtaagagtgagtttgatagaaatccagatatcaggagta cagtacccttacttcccccgtgtagagtatgtggtgagaaagcttcaggtttccattatggtgtcaacacttgtgaagca tgtaaggggttcttcaggagaagcctcaggaggaagtgtgattataaatgtgtgactggagagaaacagtgtgtgataga gcctgggagaaggaatagctgtccacaatgtcgttacttaaagtgtctcactgtcggcatgtcaaaagaagccataaaaa cgggtagatacactcatgagaagcgtactcaagatatcagagagataaagagactacagtgtggggatgtcgtcaaagaa gaacctatagaagaactgcctcatcctaatccatttcctagtgatgagctggaccatttgattggtctggtggataagag tcatgtagaaatgtatggtccactctacaagttctggattgataaggaatcaatcaaaagaaggactgaagcttatgcag aagaattcagaattcagtctgagatgtttggtttgcatggtgtatcgaaggaagaattcaaaactttctacaatcaaacg ggaattgatgtagataataggatagaactggtcagcaactttgctaatacgatggaaagaggtgttcaaaaatttatcac cttcgctaagaccatccctggtttcagtaaactcaacctggaggaccaagcaagtctagtgaagtcatccaggtttgaat tttggatctttggcttcttcaagtttgtgaacacacaagccaatgttactacaagtttactgggaagatgttatcatata aacgagttgtgtaaactatgggatgaagaatttatgaaaggcctcttcaagttttgtgggactttacaggagcttcacct gacagacacagagatatcacttatcagatgtgtttgccttatgtcaagaggatattgttgttcagtgtacttagctaagc cttag |
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Protein
| Protein ID | pfu_aug2.0_450.1_00762.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_450.1_00762.t1 MSMLGMEKLVNENDFTEKVHLRESSNTRQPAMAENSPDSGLESFSPLSDPYIPRNIKKEAVSEYMDSESFYQHSSGDDIT NSPESGIDIGADYDRKKQSDDTVPFSNYSTEHSQRMQEISQMSKSEFDRNPDIRSTVPLLPPCRVCGEKASGFHYGVNTC EACKGFFRRSLRRKCDYKCVTGEKQCVIEPGRRNSCPQCRYLKCLTVGMSKEAIKTGRYTHEKRTQDIREIKRLQCGDVV KEEPIEELPHPNPFPSDELDHLIGLVDKSHVEMYGPLYKFWIDKESIKRRTEAYAEEFRIQSEMFGLHGVSKEEFKTFYN QTGIDVDNRIELVSNFANTMERGVQKFITFAKTIPGFSKLNLEDQASLVKSSRFEFWIFGFFKFVNTQANVTTSLLGRCY HINELCKLWDEEFMKGLFKFCGTLQELHLTDTEISLIRCVCLMSRANQNLRFLKMTMEIK |
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| Protein ID | pfu_aug2.0_450.1_00762.t2 |
| Definition | - |
>pfu_aug2.0_450.1_00762.t2 MSMLGMEKLVNENDFTEKVHLRESSNTRQPAMAENSPDSGLESFSPLSDPYIPRNIKKEAVSEYMDSESFYQHSSGDDIT NSPESGIDIGADYDRKKQSDDTVPFSNYSTEHSQRMQEISQMSKSEFDRNPDIRSTVPLLPPCRVCGEKASGFHYGVNTC EACKGFFRRSLRRKCDYKCVTGEKQCVIEPGRRNSCPQCRYLKCLTVGMSKEAIKTGRYTHEKRTQDIREIKRLQCGDVV KEEPIEELPHPNPFPSDELDHLIGLVDKSHVEMYGPLYKFWIDKESIKRRTEAYAEEFRIQSEMFGLHGVSKEEFKTFYN QTGIDVDNRIELVSNFANTMERGVQKFITFAKTIPGFSKLNLEDQASLVKSSRFEFWIFGFFKFVNTQANVTTSLLGRCY HINELCKLWDEEFMKGLFKFCGTLQELHLTDTEISLIRCVCLMSRGYCCSVYLAKP |
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| Protein ID | pfu_aug2.0_450.1_00762.t3 |
| Definition | - |
>pfu_aug2.0_450.1_00762.t3 MLGMEKLVNENDFTEKVHLRESSNTRQPAMAENSPDSGLESFSPLSDPYIPRNIKKEAVSEYMDSESFYQHSSGDDITNS PESGIDIGADYDRKKQSDDTVPFSNYSTEHSQRMQEISQMSKSEFDRNPDIRSTVPLLPPCRVCGEKASGFHYGVNTCEA CKGFFRRSLRRKCDYKCVTGEKQCVIEPGRRNSCPQCRYLKCLTVGMSKEAIKTGRYTHEKRTQDIREIKRLQCGDVVKE EPIEELPHPNPFPSDELDHLIGLVDKSHVEMYGPLYKFWIDKESIKRRTEAYAEEFRIQSEMFGLHGVSKEEFKTFYNQT GIDVDNRIELVSNFANTMERGVQKFITFAKTIPGFSKLNLEDQASLVKSSRFEFWIFGFFKFVNTQANVTTSLLGRCYHI NELCKLWDEEFMKGLFKFCGTLQELHLTDTEISLIRCVCLMSRGYCCSVYLAKP |
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