Gene
| Gene Model ID | pfu_aug2.0_451.1_04182 |
|---|---|
| Locus | scaffold451.1 : 15296 ... 23264 : + |
| To GenomeBrowser | scaffold451.1:15296..23264 |
| Genes list of scaffold | scaffold451.1 |
| Synonym | pfu_aug1.0_3698.1_30497 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_451.1_04182.t1 | 2 | 1 | NACHT | 619 | 644 | 2.0e-09 | 37.3 | 2.0e-05 | 0.29 | 10.7 |
| pfu_aug2.0_451.1_04182.t1 | 2 | 2 | NACHT | 666 | 798 | 2.0e-09 | 37.3 | 2.6e-09 | 3.9e-05 | 23.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_451.1_04182.t1 | gi|260833905|ref|XP_002611952.1| | hypothetical protein BRAFLDRAFT_91836 [Branchiostoma floridae] | 7.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_451.1_04182.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04182.t1 atggatgatgcagaaataaacagactgcacaataagttgctgtatgagacaatcgccatcgattatctaagtcctggggt tggtgatcgaacggacttcgaaagattcagagccagatgtcgtaattatcttacagctccagtggatatagaaaataaca actgtagacaacttcttgataaactagtggtaaaaggtcatattaaggttgggtgctatgatgtcctgaaagaacttgtc agtttcaatgcccttttaatacaagaaattgaagacgtagagagggctataaacatgcaaagaagaagattaggtttaaa acgtagggagccaagagaagaaacaatacggatagaagagttgatcctgaggactgatttttgtgacattgttcccatgg agaatattcaatatgacaatgtcattcgccgaattagtagactaaatcgttcgttgtttagagttgcggatgaaataaca agagaccctgatttatttagggaatatactgatgcctgcaatcgcttaacggaatcgttagatgaatcgggcaagctaat cagattattctattatctcgaggaagctgaaaatacaacagaggagaaaaatatcctcaattttcatggataccccgagg gagtagaagaaaacgaaaatgggaaagaagtgttatacgcaagaaatcgaaacgaaaggatatggaatacgtctcaagtt catgtttgtcaagaaaattggaaaaactataatcgtctgcttaagagccacattacattgttacttacgctgattacaaa tagaggtgcaaatatcaggagactgctttttggttctacctactttttcttgtcatttcaatcctttgataaaatggaaa aacttatctcggaatataaaattggaatgatacaaaaagaagttcaggagattttggtcaatgaggatttcttaaaatgc tttggacttaaatcggcgaaaattgacgtatcaatagaccgggaggaagtatttcgatcccttggatcaacgagccctac cgtaatgttgagttctgcatatgccccgacacaggagacaacaaaccttaatagggtgagtcatgttctacgatgtcctt gcacggatcagctacgggatcttctacgtcatcacgtgcctccggtatcgtttccaggagtcattcaagagaaaagaaca gatctacctcgtctcacagcaccccagagagaacttatcttgccttcaaccggacaatacaccggtgactacagtgatat ggatgtgtcattgctttaccttttacttagaaatatatgcaacatgcaaccacacagaaagggctggggtttcagtccag acgatacagatttttctctatcagcatgcattgaaaggatccgagaaataagaaataagactgggcattcttcaagcagc ggtcttcctcagaaagatttcatcgaccagtggtcggatataaagagatcagtgaaatcaattgacaaacacctgaataa cgacagcaagtatgaaaatgacgtagattatttgcttgaagcatcgatggatccaaagcgggaagcattttaccttaatc tactgaagagcaaagtgaaaacagaaggaatagaggagttgcgatctttggttgcttcaatcaacgagttagaagcagac agaattcagattctttctttcaaaatggatgatacgatagatcttgatagaatctacgcttctgtatcgataatagatga atacgacaaaagaaatcgcttaacaagtgatgactccaactttcaatgtatcgcaccggataagatatttaccacaaaat caggaaaccttgcacgttttattttcatgcttggggaagccggatatggaaagaccgtacaatgtcaaagaattgcgaaa tcatggtgtcaagcgtggaataatgacacagtgagagaaagatatactcggcctcaaatttcggacttgaatagatgtct caaacagtttgactttctgttcttcatcaaaatgcgtgacgtctctattcaaagcgaaaacctaattgatctgatacaag atgtttatagtcggtaccgtctatcgaaacaaagtttaaccgatattagaatgactctcgaaaagggtgaattcaggagt cttgttctactagatggacttgatgaatggaatatatctgacgacaaaaagaaactactattggataaatgtatacccaa ttgcagaaatatgcctaaaagcacaatcttgatttcaatgagatcttggaggttcatggaagttgaaaaagtttgcattc caaatatcgacagagtgatccgactaaatggtctcgacaaagacggtgtggaagagcttccaacaaacatgttgaggaat tattttcagaccaaaacgaattttgacgatttcacggaaagaaacgcacgtgtagaaaacgccgtttcctgcgctccgac ggagataaagtccttaatgaacattccaatgctaacagttttttacattctcacattgtatgaaaatgttaaaacgggca atactctgacgacgttttatctttcaataattgaagctttattcaaaagaatgtccagaaaagcacaggctggagggatc agaggggggttctcgatttcaaagttcgtcaggacgttgccagagtatatgtggaatcgttttaggcagttgctgcctag atggttgcttcctgacagcagtcttggaacggactgtatttccttacaagaatatccgaaagttgcacaacacttgcatg aattaacacgtctgggaaaagtggcattcgaaagtttaagttcagaagagtctattttagtattcagcgaggaccagttg aatcaacagttggatgaggagatagttgatctgtttctcagagtaggcctagtgatcaaaagtgagacaacaggaagatt ccatgaagacaaaattagaatcagctttctgcataaaactattcatgaatttcttgcatcattgtatctaatctatggaa gaaaagaaacagatattgacggaattatgaaagacgtactactaattaatgttgacaaagccatagaatatacgcccgtt ctaatattcttaggtggattgtctccagcagttggttgtagaatatcaagtctcatcaagaacctgacaaatgacgacga caatattaagaaatatcgatttagttttcacacaagaagttaccaaaaaatgttccatctgtacaatttacaattgcgat gctataaagaagtgaggggatcaaaatctatcgaagcttttgaagacgaaggacaaacactaaaattttcattttccgat gtgatattactctccacggacacagacgtactcaccatcagggattcagctaaagtgatgaaatttcatccgaacgacat catttcgctgaatatggtgtgtattcccaataacgatgaggagggaatcagcaatgccgaagtgaacacttttttggatg aaagtcaatctatggaatcgttattcatcgacggctatgatagagggaaatgtagacatttcatggaatatagcaagcga atttcttacttgcaaacattaggtttgagaaatgtttcattcagggatgatattttggcagatctaataaccaaagagga gtcgaaagaacgattccgtgccctaggacttatatacatacgatcggctgaagatgacaatgtcgattttcaatatcgca ttccttcaatccatggacgaagcactacaataacgggctataggcgtcaggcgttttctatgaaaagtggcgaaaaatct aatctacagaggaagcagagaagcccacttttgaagaattttttggaaattctcccggaatacaagaagttgaaaacatt acatattacatatatggaatctgataaagatagacaaatgctgctacaagtgttgcctgaactgaagcagttacaagatg taacatacagtgggagcgttatatattctgaccctaatcacgaatatgacgccaatgtcatttcaaccgtcacaaatttg gaaaagcttcaagatgttgaacttcgctctatatatttgactggagatgttttgaattttaaaagcatgtcgagcttaga aaaaataacgcttgaagtgtttgaaatgcccacggccagtgattgggatactttattcaattcatttactaaaataaaaa ctcttcaaaagattagcctttatgacacaaatgtcccaaaagatgctcttgataaatataagacaatttgtggaagcgtt cgtattgaaaaccatgaaggtttggaatgttga |
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Protein
| Protein ID | pfu_aug2.0_451.1_04182.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04182.t1 MDDAEINRLHNKLLYETIAIDYLSPGVGDRTDFERFRARCRNYLTAPVDIENNNCRQLLDKLVVKGHIKVGCYDVLKELV SFNALLIQEIEDVERAINMQRRRLGLKRREPREETIRIEELILRTDFCDIVPMENIQYDNVIRRISRLNRSLFRVADEIT RDPDLFREYTDACNRLTESLDESGKLIRLFYYLEEAENTTEEKNILNFHGYPEGVEENENGKEVLYARNRNERIWNTSQV HVCQENWKNYNRLLKSHITLLLTLITNRGANIRRLLFGSTYFFLSFQSFDKMEKLISEYKIGMIQKEVQEILVNEDFLKC FGLKSAKIDVSIDREEVFRSLGSTSPTVMLSSAYAPTQETTNLNRVSHVLRCPCTDQLRDLLRHHVPPVSFPGVIQEKRT DLPRLTAPQRELILPSTGQYTGDYSDMDVSLLYLLLRNICNMQPHRKGWGFSPDDTDFSLSACIERIREIRNKTGHSSSS GLPQKDFIDQWSDIKRSVKSIDKHLNNDSKYENDVDYLLEASMDPKREAFYLNLLKSKVKTEGIEELRSLVASINELEAD RIQILSFKMDDTIDLDRIYASVSIIDEYDKRNRLTSDDSNFQCIAPDKIFTTKSGNLARFIFMLGEAGYGKTVQCQRIAK SWCQAWNNDTVRERYTRPQISDLNRCLKQFDFLFFIKMRDVSIQSENLIDLIQDVYSRYRLSKQSLTDIRMTLEKGEFRS LVLLDGLDEWNISDDKKKLLLDKCIPNCRNMPKSTILISMRSWRFMEVEKVCIPNIDRVIRLNGLDKDGVEELPTNMLRN YFQTKTNFDDFTERNARVENAVSCAPTEIKSLMNIPMLTVFYILTLYENVKTGNTLTTFYLSIIEALFKRMSRKAQAGGI RGGFSISKFVRTLPEYMWNRFRQLLPRWLLPDSSLGTDCISLQEYPKVAQHLHELTRLGKVAFESLSSEESILVFSEDQL NQQLDEEIVDLFLRVGLVIKSETTGRFHEDKIRISFLHKTIHEFLASLYLIYGRKETDIDGIMKDVLLINVDKAIEYTPV LIFLGGLSPAVGCRISSLIKNLTNDDDNIKKYRFSFHTRSYQKMFHLYNLQLRCYKEVRGSKSIEAFEDEGQTLKFSFSD VILLSTDTDVLTIRDSAKVMKFHPNDIISLNMVCIPNNDEEGISNAEVNTFLDESQSMESLFIDGYDRGKCRHFMEYSKR ISYLQTLGLRNVSFRDDILADLITKEESKERFRALGLIYIRSAEDDNVDFQYRIPSIHGRSTTITGYRRQAFSMKSGEKS NLQRKQRSPLLKNFLEILPEYKKLKTLHITYMESDKDRQMLLQVLPELKQLQDVTYSGSVIYSDPNHEYDANVISTVTNL EKLQDVELRSIYLTGDVLNFKSMSSLEKITLEVFEMPTASDWDTLFNSFTKIKTLQKISLYDTNVPKDALDKYKTICGSV RIENHEGLEC |
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