Gene
| Gene Model ID | pfu_aug2.0_451.1_04186 |
|---|---|
| Locus | scaffold451.1 : 180055 ... 197687 : + |
| To GenomeBrowser | scaffold451.1:180055..197687 |
| Genes list of scaffold | scaffold451.1 |
| Synonym | pfu_aug1.0_1846.1_58666 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_451.1_04186.t1 | 2 | 1 | HLH | 4 | 55 | 2.1e-08 | 33.7 | 8.4e-12 | 2.1e-08 | 33.7 |
| pfu_aug2.0_451.1_04186.t1 | 1 | 1 | PAS | 86 | 138 | 1.1e-06 | 28.3 | 3.4e-09 | 8.4e-06 | 25.5 |
| pfu_aug2.0_451.1_04186.t1 | 4 | 1 | PAS_11 | 90 | 130 | 1.8e-09 | 37.5 | 2.0e-05 | 0.049 | 13.5 |
| pfu_aug2.0_451.1_04186.t1 | 2 | 1 | PAS_3 | 98 | 140 | 5.1e-09 | 36.1 | 1.6e-06 | 0.0041 | 17.1 |
| pfu_aug2.0_451.1_04186.t1 | 4 | 2 | PAS_11 | 194 | 298 | 1.8e-09 | 37.5 | 1.5e-10 | 3.8e-07 | 30.0 |
| pfu_aug2.0_451.1_04186.t1 | 2 | 2 | PAS_3 | 207 | 290 | 5.1e-09 | 36.1 | 2.8e-06 | 0.0068 | 16.4 |
| pfu_aug2.0_451.1_04186.t1 | 4 | 3 | PAS_11 | 603 | 631 | 1.8e-09 | 37.5 | 1.7 | 4100.0 | -2.3 |
| pfu_aug2.0_451.1_04186.t1 | 2 | 2 | HLH | 664 | 682 | 2.1e-08 | 33.7 | 0.82 | 2000.0 | -1.5 |
| pfu_aug2.0_451.1_04186.t1 | 4 | 4 | PAS_11 | 669 | 679 | 1.8e-09 | 37.5 | 1.6 | 3900.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_451.1_04186.t1 | gi|676432542|ref|XP_009046608.1| | hypothetical protein LOTGIDRAFT_237855 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_451.1_04186.t1 | gi|150170685|ref|NP_001092812.1| | methoprene-tolerant [Tribolium castaneum] | 2.0e-26 |
| pfu_aug2.0_451.1_04186.t1 | gi|642918268|ref|XP_008191439.1| | PREDICTED: methoprene-tolerant isoform X1 [Tribolium castaneum] | 5.0e-26 |
| pfu_aug2.0_451.1_04186.t1 | gi|562820786|ref|XP_006140331.1| | PREDICTED: aryl hydrocarbon receptor nuclear translocator-like protein 2 [Tupaia chinensis] | 9.0e-22 |
| pfu_aug2.0_451.1_04186.t1 | gi|340715991|ref|XP_003396488.1| | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_451.1_04186.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04186.t1 atggagcacaaaaggaaattgcgcagggagggggaaaagttgcgcagagaaaagttgaaccagaggataaaggaactggc agaggctgtgccatggttacctaaatctgaacaaaggccggaaaagacgcgcattctgaaactggcagcgtcatatctta gatttcatcatggtctgaagaagaagatgttgatgaaggccctaccaccatggctacaggatgagatttcccacttctct ttagaaaagattacagatggatttctacttgtggtgtcgaggggtggaaacataatctacgtgtccgagacggtctctga ggtgcttggccactcacagctggacttgatagggagctctatttactccttaatacacgaagatgacaaaatactgtttg ataaccaattcaccaataacaactctaaattctacatcacacaggagtgtgagaaagacgatggggccaagggattccca ccagtaacaaagaatacctggttagtggctgtgggtaggagggtaaagtcagaggtgtccctggagaattccgtcagtat gtctcccattcggaactctaacgagtggatcactcagcatggactggatgctaaactttggtatcaggatcaaagggtag cgactattttgggtgtactggccagggatcatatcggaacctcagtgtatcaacatatatgtaaggaagacctcaaatac gtggccatcagccatatgaaaattatgacagacttagaatcaccttcaacgattttccgtctgcggaatatttttgacga gtttgagtatgtggaatcacgttctataatcgtcaacgatgcgtggacaaagagacctctatttatcattagtcttaatt gtctattagaaaaggtagatggtgaagggaggttacaaattcaagctgagatgtacaattctctcatcaattctactcag aatttatctatagaagattcagggagtgaagattcacaaacagaaaactgtgatcaaaggcatgtcgatgaaataagtga aacaaaactagtagaagtttcgccttccccctcaaacatatctaccgtctcagaagaaaatccttctatggatacttttc acgcgaaggaaaatgaaactttgggcgagtttaatacgacaaaatcagatgactcagtttctggccaatcttcattttgt ggtagacttcctatgctcaaaagtttgctcagagaggacccacctatttgctgtggattgagtgaagagaacgtagtgaa aaataatgtgccggtaaattttccgctagtcaaagacgatgtcgtaaaagaggaggaattaatggccagttctcaagtga aaaattcagacagtagaaataagatcttacacaaacttttgatggaggaggacgaaagaggtgatgctcatgaaaaaaaa agttcaacgcacggcagggacaaattgttacaatcgtttttatttcacgacaattcggaaaatccgccaaaagagcagtc acctcatatagacactgatcatttttatgctcaaatttccaagtatttcagtgtgccaccaagtgttcataaaaatgaaa gcacacacatttctgagaacaagacatcgatggattgtagtgagatagacgataatgctcagaataaaaatggcagctca gcaaacaaacagggtattattgattcagaattacaagaaacaaaccaggggcaagtgcaggaaactcgcactaactcaca ggaagctcaccattactcacaaagaattcatttcaactcgcaggaagctcaccatcactcacagagaattcatttcaact cacaggaaactcactgtaattccatggaaactcgcctcaacttggagaacaatgtgacagagctccctgaaaatatgcag gacaaaaagacatggcatgtgacaatggcacttcacaagcagctacgacagaaatttactgtgctgcagcacaatatgca ggagcagcacagagaaatcaatgagttgcagcacaaactaaaagagagcacaatgcatgtctcagagcacaatagcacag acagcactgatcgaaggtcacagatacttcaaaaaataaattctgttcagcatgagttgtattcacaaagaaagtccttg ttgtccttacaagaggaggccaatgaaaaatacagagaccttgtttccatgacaacaacaacagatgtcaccatgacaac agaagcagatgtttctatggcaactggacaagatattgaacaggaagtgaagtactga |
|
Protein
| Protein ID | pfu_aug2.0_451.1_04186.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04186.t1 MEHKRKLRREGEKLRREKLNQRIKELAEAVPWLPKSEQRPEKTRILKLAASYLRFHHGLKKKMLMKALPPWLQDEISHFS LEKITDGFLLVVSRGGNIIYVSETVSEVLGHSQLDLIGSSIYSLIHEDDKILFDNQFTNNNSKFYITQECEKDDGAKGFP PVTKNTWLVAVGRRVKSEVSLENSVSMSPIRNSNEWITQHGLDAKLWYQDQRVATILGVLARDHIGTSVYQHICKEDLKY VAISHMKIMTDLESPSTIFRLRNIFDEFEYVESRSIIVNDAWTKRPLFIISLNCLLEKVDGEGRLQIQAEMYNSLINSTQ NLSIEDSGSEDSQTENCDQRHVDEISETKLVEVSPSPSNISTVSEENPSMDTFHAKENETLGEFNTTKSDDSVSGQSSFC GRLPMLKSLLREDPPICCGLSEENVVKNNVPVNFPLVKDDVVKEEELMASSQVKNSDSRNKILHKLLMEEDERGDAHEKK SSTHGRDKLLQSFLFHDNSENPPKEQSPHIDTDHFYAQISKYFSVPPSVHKNESTHISENKTSMDCSEIDDNAQNKNGSS ANKQGIIDSELQETNQGQVQETRTNSQEAHHYSQRIHFNSQEAHHHSQRIHFNSQETHCNSMETRLNLENNVTELPENMQ DKKTWHVTMALHKQLRQKFTVLQHNMQEQHREINELQHKLKESTMHVSEHNSTDSTDRRSQILQKINSVQHELYSQRKSL LSLQEEANEKYRDLVSMTTTTDVTMTTEADVSMATGQDIEQEVKY |
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