Gene
| Gene Model ID | pfu_aug2.0_451.1_04187 |
|---|---|
| Locus | scaffold451.1 : 201323 ... 217134 : - |
| To GenomeBrowser | scaffold451.1:201323..217134 |
| Genes list of scaffold | scaffold451.1 |
| Synonym | pfu_aug1.0_6304.1_09312 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| oxidoreductase glyr1 homolog | GO:0004616 GO:0006098 GO:0006573 GO:0008442 GO:0051287 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_451.1_04187.t1 | 1 | 1 | NAD_binding_2 | 20 | 147 | 1.2e-24 | 86.9 | 4.0e-28 | 2.0e-24 | 86.2 |
| pfu_aug2.0_451.1_04187.t1 | 1 | 1 | NAD_binding_11 | 151 | 250 | 7.2e-19 | 68.0 | 2.9e-22 | 1.4e-18 | 67.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_451.1_04187.t1 | gi|676459719|ref|XP_009055392.1| | hypothetical protein LOTGIDRAFT_105065, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_451.1_04187.t1 | gi|524879065|ref|XP_005096212.1| | PREDICTED: putative oxidoreductase GLYR1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_451.1_04187.t1 | gi|198432669|ref|XP_002122687.1| | PREDICTED: glyoxylate/succinic semialdehyde reductase 1 isoform X1 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_451.1_04187.t1 | gi|699239238|ref|XP_009857656.1| | PREDICTED: glyoxylate/succinic semialdehyde reductase 1 isoform X2 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_451.1_04187.t1 | gi|751212519|ref|XP_011159037.1| | PREDICTED: putative oxidoreductase GLYR1 homolog [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_451.1_04187.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04187.t1 atgttaggcatacgaaaagatgttttctccagacgctatcgacatcgatcttatactaagatgtgtcgagagtttgtgaa atctggggcattcaggggcaataaccctgcagaggttgttcaagcctgcgacattacgttctcgtgcgtggcagattcga cagcagtcaaagatttagtgtttggtaattatggggtattacaaggaattacaaaggggaaatgttatgtagaaatgtcc acaatagacgaagataccatgcaagacacagcagaggcaataaaggcacggggaggcgtgtttctagaagcacctgttgt aggaagcagagttcctgcccttgaggggcaacttatcattttagccgcaggggagcgcaaactttatgatgagtgttact cctgcttcgaggccatgggcaaaaaatctctatacttaggtgatgatataggttcagctacacagatgaagttgatcgta aacatggtaatgggaacagttgtagcgagcctggcggaaggaatggccatggcggaaaaagttggtctggaccaagaaga cgtagcggaagtattctcattaggggctctatcctgccctactgtcatacataaaagtcaagcaatacttagtcagagat atgatccacattttccacttcaacatcaacagaaagatctgagactttccttattactgggggataaaatagaacagcct ctctatgtagcatcagcagctaatgaggtaagtacaaaggagtaa |
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Protein
| Protein ID | pfu_aug2.0_451.1_04187.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04187.t1 MLGIRKDVFSRRYRHRSYTKMCREFVKSGAFRGNNPAEVVQACDITFSCVADSTAVKDLVFGNYGVLQGITKGKCYVEMS TIDEDTMQDTAEAIKARGGVFLEAPVVGSRVPALEGQLIILAAGERKLYDECYSCFEAMGKKSLYLGDDIGSATQMKLIV NMVMGTVVASLAEGMAMAEKVGLDQEDVAEVFSLGALSCPTVIHKSQAILSQRYDPHFPLQHQQKDLRLSLLLGDKIEQP LYVASAANEVSTKE |
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