Gene
| Gene Model ID | pfu_aug2.0_451.1_04188 |
|---|---|
| Locus | scaffold451.1 : 217235 ... 223872 : + |
| To GenomeBrowser | scaffold451.1:217235..223872 |
| Genes list of scaffold | scaffold451.1 |
| Synonym | pfu_aug1.0_17045.1_61672 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| n-cam ig domain-containing | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_451.1_04188.t1 | 2 | 1 | LRRNT | 20 | 51 | 5.6e-08 | 32.0 | 4.1e-11 | 5.6e-08 | 32.0 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 1 | LRR_1 | 35 | 49 | 4.2e-21 | 71.7 | 3.0 | 4000.0 | -1.4 |
| pfu_aug2.0_451.1_04188.t1 | 7 | 1 | LRR_8 | 54 | 68 | 0.0 | 184.2 | 0.014 | 19.0 | 5.0 |
| pfu_aug2.0_451.1_04188.t1 | 8 | 1 | LRR_4 | 55 | 92 | 3.9e-32 | 109.3 | 8.1e-08 | 0.00011 | 21.7 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 2 | LRR_1 | 55 | 69 | 4.2e-21 | 71.7 | 0.0042 | 5.7 | 7.3 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 1 | LRR_6 | 55 | 66 | 3.3e-10 | 38.9 | 0.058 | 78.0 | 3.8 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 1 | LRR_7 | 55 | 64 | 2.5e-07 | 29.7 | 0.16 | 210.0 | 2.8 |
| pfu_aug2.0_451.1_04188.t1 | 2 | 1 | LRR_9 | 72 | 163 | 1.5e-06 | 27.8 | 4.5e-05 | 0.061 | 12.8 |
| pfu_aug2.0_451.1_04188.t1 | 4 | 1 | LRR_5 | 73 | 182 | 2.6e-23 | 82.1 | 5.5e-12 | 7.5e-09 | 35.3 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 2 | LRR_6 | 75 | 88 | 3.3e-10 | 38.9 | 0.018 | 25.0 | 5.3 |
| pfu_aug2.0_451.1_04188.t1 | 7 | 2 | LRR_8 | 79 | 136 | 0.0 | 184.2 | 4.5e-17 | 6.1e-14 | 51.5 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 3 | LRR_1 | 79 | 99 | 4.2e-21 | 71.7 | 0.00036 | 0.48 | 10.6 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 2 | LRR_7 | 80 | 91 | 2.5e-07 | 29.7 | 0.036 | 49.0 | 4.7 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 3 | LRR_6 | 99 | 115 | 3.3e-10 | 38.9 | 0.00023 | 0.32 | 11.2 |
| pfu_aug2.0_451.1_04188.t1 | 8 | 2 | LRR_4 | 101 | 139 | 3.9e-32 | 109.3 | 5.1e-09 | 6.9e-06 | 25.5 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 4 | LRR_1 | 101 | 123 | 4.2e-21 | 71.7 | 0.00028 | 0.38 | 10.9 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 3 | LRR_7 | 101 | 113 | 2.5e-07 | 29.7 | 0.013 | 17.0 | 6.1 |
| pfu_aug2.0_451.1_04188.t1 | 4 | 2 | LRR_5 | 117 | 242 | 2.6e-23 | 82.1 | 1.1e-11 | 1.5e-08 | 34.3 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 4 | LRR_6 | 125 | 143 | 3.3e-10 | 38.9 | 0.00012 | 0.16 | 12.0 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 5 | LRR_1 | 126 | 144 | 4.2e-21 | 71.7 | 0.00026 | 0.35 | 11.0 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 4 | LRR_7 | 126 | 139 | 2.5e-07 | 29.7 | 0.0085 | 11.0 | 6.6 |
| pfu_aug2.0_451.1_04188.t1 | 7 | 3 | LRR_8 | 134 | 182 | 0.0 | 184.2 | 8.8e-13 | 1.2e-09 | 37.7 |
| pfu_aug2.0_451.1_04188.t1 | 8 | 3 | LRR_4 | 150 | 185 | 3.9e-32 | 109.3 | 8.3e-07 | 0.0011 | 18.5 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 6 | LRR_1 | 150 | 168 | 4.2e-21 | 71.7 | 0.00014 | 0.2 | 11.8 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 5 | LRR_6 | 150 | 162 | 3.3e-10 | 38.9 | 0.0013 | 1.7 | 8.9 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 5 | LRR_7 | 150 | 163 | 2.5e-07 | 29.7 | 0.0037 | 5.0 | 7.7 |
| pfu_aug2.0_451.1_04188.t1 | 7 | 4 | LRR_8 | 173 | 234 | 0.0 | 184.2 | 2.9e-14 | 4.0e-11 | 42.5 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 6 | LRR_7 | 173 | 183 | 2.5e-07 | 29.7 | 0.64 | 860.0 | 1.0 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 7 | LRR_1 | 174 | 182 | 4.2e-21 | 71.7 | 2.5 | 3400.0 | -1.1 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 6 | LRR_6 | 174 | 183 | 3.3e-10 | 38.9 | 1.1 | 1500.0 | -0.2 |
| pfu_aug2.0_451.1_04188.t1 | 4 | 3 | LRR_5 | 188 | 286 | 2.6e-23 | 82.1 | 2.6e-11 | 3.5e-08 | 33.2 |
| pfu_aug2.0_451.1_04188.t1 | 8 | 4 | LRR_4 | 192 | 213 | 3.9e-32 | 109.3 | 4.4e-06 | 0.0059 | 16.1 |
| pfu_aug2.0_451.1_04188.t1 | 8 | 5 | LRR_4 | 196 | 240 | 3.9e-32 | 109.3 | 2.7e-07 | 0.00036 | 20.0 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 7 | LRR_6 | 196 | 211 | 3.3e-10 | 38.9 | 0.00082 | 1.1 | 9.5 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 8 | LRR_1 | 197 | 213 | 4.2e-21 | 71.7 | 0.0045 | 6.0 | 7.3 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 7 | LRR_7 | 197 | 211 | 2.5e-07 | 29.7 | 0.02 | 27.0 | 5.5 |
| pfu_aug2.0_451.1_04188.t1 | 7 | 5 | LRR_8 | 223 | 282 | 0.0 | 184.2 | 2.6e-16 | 3.5e-13 | 49.1 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 9 | LRR_1 | 223 | 243 | 4.2e-21 | 71.7 | 0.027 | 36.0 | 4.9 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 8 | LRR_6 | 223 | 238 | 3.3e-10 | 38.9 | 0.024 | 33.0 | 4.9 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 8 | LRR_7 | 223 | 237 | 2.5e-07 | 29.7 | 0.28 | 380.0 | 2.1 |
| pfu_aug2.0_451.1_04188.t1 | 2 | 2 | LRR_9 | 232 | 329 | 1.5e-06 | 27.8 | 1.0e-05 | 0.014 | 15.0 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 9 | LRR_6 | 246 | 260 | 3.3e-10 | 38.9 | 0.0024 | 3.2 | 8.1 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 9 | LRR_7 | 246 | 261 | 2.5e-07 | 29.7 | 0.01 | 13.0 | 6.4 |
| pfu_aug2.0_451.1_04188.t1 | 8 | 6 | LRR_4 | 247 | 282 | 3.9e-32 | 109.3 | 9.7e-10 | 1.3e-06 | 27.8 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 10 | LRR_1 | 247 | 269 | 4.2e-21 | 71.7 | 3.1e-05 | 0.042 | 13.8 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 10 | LRR_6 | 269 | 281 | 3.3e-10 | 38.9 | 0.34 | 450.0 | 1.4 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 11 | LRR_1 | 271 | 291 | 4.2e-21 | 71.7 | 0.09 | 120.0 | 3.3 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 10 | LRR_7 | 271 | 283 | 2.5e-07 | 29.7 | 0.43 | 570.0 | 1.5 |
| pfu_aug2.0_451.1_04188.t1 | 8 | 7 | LRR_4 | 287 | 303 | 3.9e-32 | 109.3 | 0.32 | 420.0 | 0.7 |
| pfu_aug2.0_451.1_04188.t1 | 7 | 6 | LRR_8 | 295 | 356 | 0.0 | 184.2 | 2.6e-14 | 3.4e-11 | 42.7 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 12 | LRR_1 | 295 | 304 | 4.2e-21 | 71.7 | 0.82 | 1100.0 | 0.4 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 11 | LRR_7 | 295 | 303 | 2.5e-07 | 29.7 | 1.4 | 1900.0 | 0.0 |
| pfu_aug2.0_451.1_04188.t1 | 4 | 4 | LRR_5 | 306 | 369 | 2.6e-23 | 82.1 | 3.6e-05 | 0.049 | 13.3 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 11 | LRR_6 | 318 | 330 | 3.3e-10 | 38.9 | 0.0017 | 2.3 | 8.5 |
| pfu_aug2.0_451.1_04188.t1 | 8 | 8 | LRR_4 | 319 | 360 | 3.9e-32 | 109.3 | 5.7e-08 | 7.6e-05 | 22.2 |
| pfu_aug2.0_451.1_04188.t1 | 7 | 7 | LRR_8 | 320 | 378 | 0.0 | 184.2 | 1.5e-11 | 2.0e-08 | 33.8 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 13 | LRR_1 | 320 | 343 | 4.2e-21 | 71.7 | 0.00049 | 0.66 | 10.2 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 12 | LRR_7 | 320 | 334 | 2.5e-07 | 29.7 | 0.012 | 16.0 | 6.2 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 14 | LRR_1 | 347 | 364 | 4.2e-21 | 71.7 | 0.00032 | 0.43 | 10.7 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 12 | LRR_6 | 347 | 357 | 3.3e-10 | 38.9 | 0.051 | 69.0 | 3.9 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 13 | LRR_7 | 347 | 359 | 2.5e-07 | 29.7 | 0.027 | 36.0 | 5.1 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 15 | LRR_1 | 372 | 381 | 4.2e-21 | 71.7 | 0.45 | 600.0 | 1.2 |
| pfu_aug2.0_451.1_04188.t1 | 13 | 13 | LRR_6 | 372 | 381 | 3.3e-10 | 38.9 | 4.9 | 6600.0 | -2.2 |
| pfu_aug2.0_451.1_04188.t1 | 2 | 2 | LRRNT | 380 | 384 | 5.6e-08 | 32.0 | 4.3 | 5900.0 | -3.1 |
| pfu_aug2.0_451.1_04188.t1 | 16 | 16 | LRR_1 | 873 | 888 | 4.2e-21 | 71.7 | 7.9 | 11000.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_451.1_04188.t1 | gi|524879059|ref|XP_005096209.1| | PREDICTED: uncharacterized protein ZC262.3-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_451.1_04188.t1 | gi|241725231|ref|XP_002413728.1| | N-CAM Ig domain-containing protein, putative [Ixodes scapularis] | 8.00001e-41 |
| pfu_aug2.0_451.1_04188.t1 | gi|749752244|ref|XP_011138460.1| | PREDICTED: leucine-rich repeats and immunoglobulin-like domains protein 3 isoform X1 [Harpegnathos saltator] | 1.0e-37 |
| pfu_aug2.0_451.1_04188.t1 | gi|754352927|ref|XP_011270835.1| | hypothetical protein CAOG_09125 [Capsaspora owczarzaki ATCC 30864] | 2.0e-37 |
| pfu_aug2.0_451.1_04188.t1 | gi|499005339|ref|XP_004535553.1| | PREDICTED: leucine-rich repeat neuronal protein 3 [Ceratitis capitata] | 3.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_451.1_04188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04188.t1 atggggaaaatctttgtattgctaacgatcgtctgctctctcgcgtgtggggaaacgatgtgtccaaggcagtgccgatg ttactcaactatgggacaaaaatctgtggattgttccggagggaatttaacggaagttccttcagatgttccaacagatg tgcaggtattggatctcagcaacaatctcatccaaaatataacaagtgttatagaatataatcttacagaaatagtgact cttgatctctccaacaatgatcttcaatctctacaacaaagaatgtttagaaaccttcgaaatctacaaagtctggacct atcatttaattcgataaaaacaagtgacgatgatgtgtttgaaaatctaaatcttctctctcatctggacctatcgtgga ataatcttacacagatcggagctgattttttggatggtgtgtcagatctacaagtgttgaacttgagcaataatccaata catgaaattcatcaagacattttcacggatgtatcagctcttagatcattagatctcgcaaacacttcatactggatctt ggatgatagaatatttggaaatctggagaatttgacagatctaaacttgcagcataactatattactaatatatcatcag ttcggtcatcctttcaagatgccatttctctcaggtctcttcagctggcattcaacaacattgaaaacttgacagcatat tcttttgaccattggtcaagcttggaagagcttgacctcagccataattggatatcttctcttgaggaacatacatttga aggtctacagaagttgaaaactctaaagttggacaacaatttactagtctacgttacactgcctgtattttcacctctgg tttccttgcgaagattatcactgtctggaatggcagaaatgatgtacttaggcaaacagagctttcatggattgaagaat ctaacatatctaaatctgtccagcaacgagaagctaggattcctgcacgaggaaatatttcacggcttggaggagatgaa attcctgaaccttagccataataacatatcacatctatccgagtcaacattcccgatgccatccaatttctcagtggata tttccggcaataactttgagtgtgactgccacttcgaatggctagtgcgcaaaataaactccaaatctgctcaaaacagg ggaactcaatttgtgaacgtagaaaatatattttgcaaatatctcaataagtcagttctacctctacaaagtctttataa tgtgtccctacagtgccaatcaacacatgcttctgctgctcaagtggaaataaaatttgctcttggatcctccgttagga tcacatgtccgtttgtggattatccgcctcccacgatcacgtggatcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnngcctcataagttgaatttaaccgttgatctagctcatccaatcagctttctcgaccatccctccatt ttggacactcgggagaatggttcatatcatatcggacattactggcataattcagattcatattttccggaattagagga tcggaaagaccgaattataattctacgtgacggatccttatatattgactactttctccgcaccgacacaggtccataca agtgcattattgactccactcaaaacacgtccacagttctatttttagtatggatcgacaacgatatattcattgaagtc aaagtgatgagtcttttagttggttttggatgtgctgcatcttttttcatgttaaatcttatccaagtgttcataatggc tttggccagacggtgcattaaccaaagacgacgagaggcgatagctcaatttgttgacaatttcgagaagtatcgtactg ccaagcttggatctctgaaggataattacaatgctcagatggcaagaattcgggatacctaccgaaataggatggataaa ttaagtgacagctacaccaatcaaatgatgcgcattcgagaaggtgcgtcacaaatcaaggaaggtacgtcccaccgagt cgacattatccgcgacaaataccacaatcagcagaagaaaatacgagactatagttcccatcagatgaatcaattacgag aagcttacaatcatcagattctccgaatacgagattacggctcaacgcagttggccaaaattcacaagaagtacaaactc aaacagaaacatatgatgaaaatgttcgaaactatgaacattgaaaactgtcgaaccatggtagatgtggagtgcgtacg aactgattcggaattgtttgaaactgaggaaattctcattccggaagaatcacagtccgtcagttccgatgagtatctta cagcaacgtcacatacatcgtctcatcatagcagccgacaaaatttacgagaatctaatttacacgataatgactgtaca gtggcattgccaccagatactcttagaggggagaacgagatacctcactgccatttttccgacgaagatattatggaggg ggaagaccctcttttttcaacaccacaaagtgctactctcatgagtgaatttgaactagagaatttcactttcattgatg gaatggatactctagaggtcgacattgaggttgacaaagctccagaagatgaggctgtaggaagcgaccaaatacatata gatgtcaaaaatgaggacggtgttgctctagaagccaaaaatgaaaactctaatgctttaaatcgtgatgagtactgcag catggatagggaaactattgtttag |
|
Protein
| Protein ID | pfu_aug2.0_451.1_04188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04188.t1 MGKIFVLLTIVCSLACGETMCPRQCRCYSTMGQKSVDCSGGNLTEVPSDVPTDVQVLDLSNNLIQNITSVIEYNLTEIVT LDLSNNDLQSLQQRMFRNLRNLQSLDLSFNSIKTSDDDVFENLNLLSHLDLSWNNLTQIGADFLDGVSDLQVLNLSNNPI HEIHQDIFTDVSALRSLDLANTSYWILDDRIFGNLENLTDLNLQHNYITNISSVRSSFQDAISLRSLQLAFNNIENLTAY SFDHWSSLEELDLSHNWISSLEEHTFEGLQKLKTLKLDNNLLVYVTLPVFSPLVSLRRLSLSGMAEMMYLGKQSFHGLKN LTYLNLSSNEKLGFLHEEIFHGLEEMKFLNLSHNNISHLSESTFPMPSNFSVDISGNNFECDCHFEWLVRKINSKSAQNR GTQFVNVENIFCKYLNKSVLPLQSLYNVSLQCQSTHASAAQVEIKFALGSSVRITCPFVDYPPPTITWIXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHKLNLTVDLAHPISFLDHPSI LDTRENGSYHIGHYWHNSDSYFPELEDRKDRIIILRDGSLYIDYFLRTDTGPYKCIIDSTQNTSTVLFLVWIDNDIFIEV KVMSLLVGFGCAASFFMLNLIQVFIMALARRCINQRRREAIAQFVDNFEKYRTAKLGSLKDNYNAQMARIRDTYRNRMDK LSDSYTNQMMRIREGASQIKEGTSHRVDIIRDKYHNQQKKIRDYSSHQMNQLREAYNHQILRIRDYGSTQLAKIHKKYKL KQKHMMKMFETMNIENCRTMVDVECVRTDSELFETEEILIPEESQSVSSDEYLTATSHTSSHHSSRQNLRESNLHDNDCT VALPPDTLRGENEIPHCHFSDEDIMEGEDPLFSTPQSATLMSEFELENFTFIDGMDTLEVDIEVDKAPEDEAVGSDQIHI DVKNEDGVALEAKNENSNALNRDEYCSMDRETIV |
|