Gene
| Gene Model ID | pfu_aug2.0_451.1_04189 |
|---|---|
| Locus | scaffold451.1 : 223876 ... 233134 : - |
| To GenomeBrowser | scaffold451.1:223876..233134 |
| Genes list of scaffold | scaffold451.1 |
| Synonym | pfu_aug1.0_17045.1_61673 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_451.1_04189.t1 | 2 | 1 | PWWP | 1 | 75 | 2.9e-13 | 49.8 | 1.3e-16 | 2.9e-13 | 49.8 |
| pfu_aug2.0_451.1_04189.t1 | 2 | 2 | PWWP | 81 | 97 | 2.9e-13 | 49.8 | 0.81 | 1700.0 | -0.8 |
| pfu_aug2.0_451.1_04189.t1 | 1 | 1 | NAD_binding_2 | 213 | 247 | 1.3e-09 | 38.0 | 9.7e-13 | 2.1e-09 | 37.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_451.1_04189.t1 | gi|676459716|ref|XP_009055391.1| | hypothetical protein LOTGIDRAFT_153226 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_451.1_04189.t1 | gi|675868814|ref|XP_009019967.1| | hypothetical protein HELRODRAFT_106726 [Helobdella robusta] | 8.0e-31 |
| pfu_aug2.0_451.1_04189.t1 | gi|557000837|ref|XP_006003101.1| | PREDICTED: putative oxidoreductase GLYR1-like [Latimeria chalumnae] | 8.0e-29 |
| pfu_aug2.0_451.1_04189.t1 | gi|632973258|ref|XP_007903066.1| | PREDICTED: putative oxidoreductase GLYR1 [Callorhinchus milii] | 7.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_451.1_04189.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04189.t1 atgaaaagtttcccggcttggccaggaaagatcatcgagccaaagcctgatgtgaagaaacctaagatgaaaactcctca acatttcattttcttcttcggttctgagaattatgcatggatgcaagaagagcaactcttcctgtatagcgatcacaaag acagattcaaattgactaaacggttgccacggggatataaagaggctgtggaagccattgatgatgaactcaaagcaaaa ccatgtgtcgtcaaaaaagataaaggtagttcgactgaagagaaaaagaaagtaagcaaaaaagataataccggtagtgt gccaaagaagagaggaagacctccatcttcggataaggaagatagaccgaagaaagccaaggttgccaaagtgatggggt caccgagtacggcatcttttggtccagaggtcacacggatcaggcctaaagtctcagcagacatgtcatcagaaggtctc ggcagtatggccatgtctccgcccagtaacagctacatacaagcctcccttccttcctcaccgattaaaccctcggcagg cacgcagattgaggaatctatcctcctagagaaatcggccacgcccatcgtcaagtccgccgtcatccccacacccatga ggatcggattcctcggactgggaattatgggtcagggaatggtgatgaacttattgaggtcggggcatgaagttaccgtg tggaacagaacggctatgaagttctaa |
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Protein
| Protein ID | pfu_aug2.0_451.1_04189.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04189.t1 MKSFPAWPGKIIEPKPDVKKPKMKTPQHFIFFFGSENYAWMQEEQLFLYSDHKDRFKLTKRLPRGYKEAVEAIDDELKAK PCVVKKDKGSSTEEKKKVSKKDNTGSVPKKRGRPPSSDKEDRPKKAKVAKVMGSPSTASFGPEVTRIRPKVSADMSSEGL GSMAMSPPSNSYIQASLPSSPIKPSAGTQIEESILLEKSATPIVKSAVIPTPMRIGFLGLGIMGQGMVMNLLRSGHEVTV WNRTAMKF |
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