Gene
| Gene Model ID | pfu_aug2.0_451.1_04190 |
|---|---|
| Locus | scaffold451.1 : 238185 ... 242863 : + |
| To GenomeBrowser | scaffold451.1:238185..242863 |
| Genes list of scaffold | scaffold451.1 |
| Synonym | pfu_aug1.0_3454.1_08626 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_451.1_04190.t1 | 8 | 1 | zf-C2H2_6 | 9 | 14 | 1.0e-12 | 47.4 | 5.6 | 5500.0 | -2.5 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 1 | zf-H2C2_2 | 155 | 170 | 0.0 | 163.3 | 1.9e-06 | 0.0019 | 18.3 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 1 | zf-C2H2 | 159 | 181 | 4.7e-29 | 98.9 | 0.0015 | 1.5 | 9.2 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 1 | zf-C2H2_4 | 159 | 179 | 3.8e-22 | 76.9 | 0.00025 | 0.25 | 11.7 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 1 | zf-C2H2_jaz | 159 | 178 | 4.0e-19 | 68.1 | 9.1e-07 | 0.0009 | 19.3 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 1 | zf-met | 159 | 179 | 1.3e-14 | 53.7 | 0.00069 | 0.69 | 10.2 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 2 | zf-C2H2_6 | 159 | 169 | 1.0e-12 | 47.4 | 0.003 | 3.0 | 7.8 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 2 | zf-H2C2_2 | 174 | 197 | 0.0 | 163.3 | 0.00015 | 0.15 | 12.4 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 2 | zf-C2H2 | 187 | 208 | 4.7e-29 | 98.9 | 6.8e-08 | 6.7e-05 | 22.9 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 2 | zf-C2H2_4 | 187 | 208 | 3.8e-22 | 76.9 | 8.3e-08 | 8.2e-05 | 22.6 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 2 | zf-C2H2_jaz | 188 | 206 | 4.0e-19 | 68.1 | 0.00049 | 0.48 | 10.6 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 2 | zf-met | 188 | 206 | 1.3e-14 | 53.7 | 3.3e-05 | 0.033 | 14.4 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 3 | zf-C2H2_6 | 188 | 197 | 1.0e-12 | 47.4 | 0.0051 | 5.0 | 7.1 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 3 | zf-H2C2_2 | 202 | 224 | 0.0 | 163.3 | 3.7e-11 | 3.7e-08 | 33.2 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 4 | zf-C2H2_6 | 213 | 236 | 1.0e-12 | 47.4 | 1.5e-05 | 0.015 | 15.1 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 3 | zf-C2H2 | 214 | 236 | 4.7e-29 | 98.9 | 4.3e-06 | 0.0043 | 17.3 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 3 | zf-C2H2_4 | 214 | 236 | 3.8e-22 | 76.9 | 0.003 | 2.9 | 8.4 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 3 | zf-met | 214 | 232 | 1.3e-14 | 53.7 | 0.032 | 32.0 | 4.9 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 3 | zf-C2H2_jaz | 216 | 233 | 4.0e-19 | 68.1 | 0.069 | 68.0 | 3.7 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 4 | zf-H2C2_2 | 228 | 252 | 0.0 | 163.3 | 2.5e-10 | 2.5e-07 | 30.6 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 4 | zf-C2H2 | 242 | 264 | 4.7e-29 | 98.9 | 5.2e-08 | 5.1e-05 | 23.3 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 4 | zf-C2H2_4 | 242 | 264 | 3.8e-22 | 76.9 | 1.4e-05 | 0.014 | 15.7 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 4 | zf-C2H2_jaz | 242 | 262 | 4.0e-19 | 68.1 | 1.6e-06 | 0.0016 | 18.4 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 4 | zf-met | 242 | 262 | 1.3e-14 | 53.7 | 0.00049 | 0.49 | 10.6 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 5 | zf-C2H2_6 | 242 | 264 | 1.0e-12 | 47.4 | 0.00059 | 0.58 | 10.1 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 5 | zf-H2C2_2 | 257 | 280 | 0.0 | 163.3 | 4.3e-10 | 4.2e-07 | 29.9 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 5 | zf-C2H2 | 270 | 292 | 4.7e-29 | 98.9 | 3.4e-07 | 0.00033 | 20.8 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 5 | zf-C2H2_4 | 270 | 292 | 3.8e-22 | 76.9 | 1.1e-06 | 0.0011 | 19.1 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 5 | zf-C2H2_jaz | 270 | 290 | 4.0e-19 | 68.1 | 0.00026 | 0.26 | 11.4 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 5 | zf-met | 270 | 288 | 1.3e-14 | 53.7 | 0.00072 | 0.71 | 10.1 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 6 | zf-C2H2_6 | 271 | 292 | 1.0e-12 | 47.4 | 0.00051 | 0.5 | 10.3 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 6 | zf-H2C2_2 | 284 | 309 | 0.0 | 163.3 | 3.8e-10 | 3.8e-07 | 30.0 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 7 | zf-C2H2_6 | 297 | 321 | 1.0e-12 | 47.4 | 1.8e-05 | 0.018 | 14.9 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 6 | zf-C2H2 | 298 | 320 | 4.7e-29 | 98.9 | 1.0e-07 | 9.9e-05 | 22.4 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 6 | zf-C2H2_4 | 298 | 320 | 3.8e-22 | 76.9 | 3.4e-05 | 0.034 | 14.4 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 6 | zf-C2H2_jaz | 298 | 318 | 4.0e-19 | 68.1 | 0.0001 | 0.1 | 12.7 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 6 | zf-met | 298 | 318 | 1.3e-14 | 53.7 | 2.7e-05 | 0.027 | 14.6 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 7 | zf-H2C2_2 | 313 | 336 | 0.0 | 163.3 | 2.2e-10 | 2.2e-07 | 30.8 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 7 | zf-C2H2 | 326 | 348 | 4.7e-29 | 98.9 | 0.019 | 19.0 | 5.8 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 7 | zf-C2H2_jaz | 326 | 351 | 4.0e-19 | 68.1 | 0.00012 | 0.12 | 12.5 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 7 | zf-met | 326 | 350 | 1.3e-14 | 53.7 | 0.016 | 16.0 | 5.8 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 7 | zf-C2H2_4 | 327 | 348 | 3.8e-22 | 76.9 | 0.032 | 32.0 | 5.1 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 8 | zf-H2C2_2 | 341 | 372 | 0.0 | 163.3 | 0.015 | 14.0 | 6.1 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 8 | zf-C2H2_6 | 361 | 381 | 1.0e-12 | 47.4 | 1.9e-05 | 0.019 | 14.8 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 8 | zf-C2H2 | 362 | 384 | 4.7e-29 | 98.9 | 0.00021 | 0.21 | 11.9 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 8 | zf-C2H2_4 | 362 | 384 | 3.8e-22 | 76.9 | 0.0026 | 2.6 | 8.5 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 8 | zf-C2H2_jaz | 362 | 381 | 4.0e-19 | 68.1 | 0.45 | 450.0 | 1.1 |
| pfu_aug2.0_451.1_04190.t1 | 8 | 8 | zf-met | 362 | 381 | 1.3e-14 | 53.7 | 0.0024 | 2.3 | 8.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_451.1_04190.t1 | gi|742077827|ref|XP_010834622.1| | PREDICTED: zinc finger protein 239-like, partial [Bison bison bison] | 0.0 |
| pfu_aug2.0_451.1_04190.t1 | gi|641678688|ref|XP_008188255.1| | PREDICTED: zinc finger protein 271-like, partial [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_451.1_04190.t1 | gi|193600252|ref|XP_001950651.1| | PREDICTED: zinc finger protein 2-like [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_451.1_04190.t1 | gi|328704791|ref|XP_003242604.1| | PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_451.1_04190.t1 | gi|328715046|ref|XP_001949223.2| | PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_451.1_04190.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04190.t1 atgatgattctctgcttcaaaatatgtttgagatgtaaaattgagcagcaaaagcattgtaaaaaaatacgccaaaatcc taaagatggacaatttatttccaaaagctgtataaactatgcagtatctggctgtaaaaacagtgagcctcgtgatggaa ttaggaacgacaagagtgtgttaaatgcccataggctgcaagaatgcaagctaaatctggaggttaaccataattctgca ttcaacatggaggaggaggaggaggaggtgggcatcgttataaagagtgaaataggcaatcatgacttgtgtgaacgtga aggaaatttgatgaatggaactgatattgaagccttagacctttcactgcataaaaagaataatttttctgttagtgaac ttaacgacaatgaagatggagaaaaaataaatgtaccatcagaacctgaagatagccctcaaggagagaagccgttcaaa tgcaaattttgtgacaaatggttcgcacacaagaagggtctcgacgtacacgaacaattgcatgcaggacatcaagtgcc atgtccagtctgcgggaaaacgttcgctagcaagacttacgtgcggaaacacatgaagattcacagcggagaaaaacctt atcaatgtgacgtttgcgaaaatagattttcacgaagatttgcccttgaagaacatcggaggttacacacaggagacaag ccattttcgtgtgaatattgcgaccggacgtttgcccaacgatcaactctaagggaacatctcaaactacatacaggaca acaattttatgcgtgcgatttgtgcgataaaaaattttcccagcgacgcagcttaacggtacaccaaaaagttcatacag gagagaacctttttacatgtgaagtatgcgataaaggtttcggatataaatcaacacttagggtacacatgaaagtacat tctggagaaaaaccgttcaagtgttttccgtgtaataaaagttttgcacggaagtgcggttttgaaaagcacaagacaac acacaaacataagaaagcatttgcaggagagatgcttatagtttataattgcgatatttgtttaattaaattttcagatt attctgactttatgttacaccagaatgaccatgaaagaaaccaagagggaagctttacattatcaagtaaaaaccaatct cagatgacgctagttccggaaacagagataagtgaagtaataaaaccagaggattgctttgaacatgacataagcaatga agatgatgaagaactaaactctgatgatgaagaatcagtttctgaacatggggaagaacaaagtcctgaacatggggaag aaccaatttctgaacaagatgaagaattaatttctgaagatgaagaaataatttctgaaggtgatgaagaatatatttct gaacttggagtagaatcagtttctgaacgtcataaagaaccaatagctgaacataaaagtgagtcatttgctgaacatga tgaagaacctgtctctgagctcggtgaagaacctatttctgaacatgaggaagaacctttttctgagcttggtgaagaac ctatttctgagcttggtaaagaacctatttctgaacatgaagaagatcccccttctacagatgatgaagaacctatttct gatcatgaacatgatgaacaatcaatttctgaactgactgaatgtgtgaaaagtgagtgttaa |
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Protein
| Protein ID | pfu_aug2.0_451.1_04190.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_451.1_04190.t1 MMILCFKICLRCKIEQQKHCKKIRQNPKDGQFISKSCINYAVSGCKNSEPRDGIRNDKSVLNAHRLQECKLNLEVNHNSA FNMEEEEEEVGIVIKSEIGNHDLCEREGNLMNGTDIEALDLSLHKKNNFSVSELNDNEDGEKINVPSEPEDSPQGEKPFK CKFCDKWFAHKKGLDVHEQLHAGHQVPCPVCGKTFASKTYVRKHMKIHSGEKPYQCDVCENRFSRRFALEEHRRLHTGDK PFSCEYCDRTFAQRSTLREHLKLHTGQQFYACDLCDKKFSQRRSLTVHQKVHTGENLFTCEVCDKGFGYKSTLRVHMKVH SGEKPFKCFPCNKSFARKCGFEKHKTTHKHKKAFAGEMLIVYNCDICLIKFSDYSDFMLHQNDHERNQEGSFTLSSKNQS QMTLVPETEISEVIKPEDCFEHDISNEDDEELNSDDEESVSEHGEEQSPEHGEEPISEQDEELISEDEEIISEGDEEYIS ELGVESVSERHKEPIAEHKSESFAEHDEEPVSELGEEPISEHEEEPFSELGEEPISELGKEPISEHEEDPPSTDDEEPIS DHEHDEQSISELTECVKSEC |
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