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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_452.1_07538
Locus scaffold452.1 : 117999 ... 126523 : -
To GenomeBrowser scaffold452.1:117999..126523
Genes list of scaffold scaffold452.1
Synonym pfu_aug1.0_1442.1_22594

Manual annotation
Transcript
Transcript IDpfu_aug2.0_452.1_07538.t1
Definition-
>pfu_aug2.0_452.1_07538.t1
atgaaaaggaaaaaagtacagacgccgtggatgccgtgttttaaaagtgaaagaaaaatcacaaatatgaataaatcact
gatccaatggctttcaatccttatatgcattcgcatgactcaaggacaaacagcacaagtggcaccgttcagcatgaccg
agccgagttgtgtcataacgctagatgaccctgaagacaaaactcacttgaacggcctttctgacaatggagcaaagctg
gtttatgtctactttactaacaagggaaaagacatgcagagaaataagactttttcaacaaaattgtatgatcctttcac
atgggcacgtacatcaggaactcacgggaccggcatcctaaggttggattctgctattgtctacataacaacgctcagca
tcggagtgaaagaggtcaaggtcaacttaacacaaacgccaaacgactgtctcagtaaccttgacgacgataccttccaa
acagtcataagggacttcatgttacatgattttgtatcaagaaccgaaaatcgaacaattccgcttcaatcagattggaa
ggtctgtaacatgcaaattcgtaagggagacgagaacgaggctgagttctattacgaatgttgtcacgtgagcgagacgg
gggacatcgtttgttcagaacttgccaagggatttctgatggaagtattaattttcatcattttgtttttgaatattgct
gccgttctttttgctccattgataataccaagctcgtgtttcaaggacaagtacaataaagtaacttttattcataaact
atctaagccaatgaacctcgtcgtaaggaaaaaggcaattgtgcggcatgctgaaatgggtccaaatgtagtgaacaaaa
gctctattactcgtgatgaatgctgtatgccaaactttgaaaaaattctcaattcatttgaagatgacacttcatattgt
ctccagatttcaaaacttcgatttcgtgtaaaggcagacaagattctgtcgaagggagagtcaccaattggaatcttgag
cagtctttattcatcatttgtcttatgcaatctgcggaacaaagagtctctaaaacctttttgtaataaaagaatggtcc
cgtgccttcgtgttaagttctacaccttctttcggtctttgatggctctggtttttgctgctataattgcctcaccatgg
atcataagagttcttgtgtactatatgtatgaggaagcggaagtgtcagatcgcaaggaactagccagtaagtacggact
gacagacagatttaccggaaatatactcagattcttcactccactacatgccttcttcttggtctgttatactgttttgg
ttttggatgccatggttcttggggtagtgagtaaagaagtttcgaagacattgaaatatatcatgcgtgaatgtttacgt
gatatggcgaatagttctcgcgcacgcgctcttggatggtgtctgaagttattgctacagcccctgacacagtatggact
ttgtgggcttatcatcttgccactttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnactggattatagcccttcctctagtagcggcaatgatagttttcttcatgctgccaacaattaacat
gtttgtacgactggttatcaactttgcgatgttttgtggtcttcgagacatatcatgtagtccgtgctcgcattgtatct
cgaactgcaatgacaaattgtgcgagttactagacttaaaatatctcttcaagaaagagagaataaggcgaccggaagct
acaattagtcgaggagacagaagtattcaacttgcagcgggagctttttcccttataagtctggtctcttttgcgttttt
ggccagtgaatgtataatatttatcgtggagtacacagtatttaccgtcatcggggttattctgaacgctgacattgcgt
tacaatatctcacagtcgttttaatgatatttttatacgcaagagattgcttcgtcactgtcaccaagaaatacgtggca
tacaactccacacttcacgaggcagcggtggataggattgagaagaaactaatggaacacaacggtgaaaacaatgcgta
cttactgccaacgaaaaaagaagaacagcaaaggttgcttgaactggtaatcgagaatgacaaactcaaatggaaaccgt
ggcaagtcattgcgttttacgacgaaaacgacaaattctacattacagaggaattcttctttcaagctgtaaaccttgaa
aactgtaattgccctggtccactctcaggaaatctcataaacgccacggctaaactattagtaattattgtgttcctttt
ctttgtggcgctgacagtgatggcatttggaaacgagtacgagatttccagcttcaaccagaccattgctaccgttatta
ctggattcatcccctttgcactcacgaatttcctctttaaatcgaacgatatatctgctatagataaagatgatgctcat
ttcaacatccagctagatagaaaaatcagagatttcaatcaaacatggcgtgtgttggattttgatgttaattcgtactc
taaaatatcaactgaacaacatagtagccataatgacagtgggcattcccaaggcgatacgtcagaatcaattcctgaaa
atgaaagttctccgatggtagacgaaatttttacgtgcgacatggaagttgggaatgcgattgctggtcaacgttttgat
aatatcaaggtcagcaataaaaaggagctaatcattaatacaaccgatcaaatgtttcattttatcaatattgattgtct
tggttctgatgtgtaa
Transcript IDpfu_aug2.0_452.1_07538.t2
Definition-
>pfu_aug2.0_452.1_07538.t2
atgggaatgatgaataaatcactgatccaatggctttcaatccttatatgcattcgcatgactcaaggacaaacagcaca
agtggcaccgttcagcatgaccgagccgagttgtgtcataacgctagatgaccctgaagacaaaactcacttgaacggcc
tttctgacaatggagcaaagctggtttatgtctactttactaacaagggaaaagacatgcagagaaataagactttttca
acaaaattgtatgatcctttcacatgggcacgtacatcaggaactcacgggaccggcatcctaaggttggattctgctat
tgtctacataacaacgctcagcatcggagtgaaagaggtcaaggtcaacttaacacaaacgccaaacgactgtctcagta
accttgacgacgataccttccaaacagtcataagggacttcatgttacatgattttgtatcaagaaccgaaaatcgaaca
attccgcttcaatcagattggaaggtctgtaacatgcaaattcgtaagggagacgagaacgaggctgagttctattacga
atgttgtcacgtgagcgagacgggggacatcgtttgttcagaacttgccaagggatttctgatggaagtattaattttca
tcattttgtttttgaatattgctgccgttctttttgctccattgataataccaagctcgtgtttcaaggacaagtacaat
aaagtaacttttattcataaactatctaagccaatgaacctcgtcgtaaggaaaaaggcaattgtgcggcatgctgaaat
gggtccaaatgtagtgaacaaaagctctattactcgtgatgaatgctgtatgccaaactttgaaaaaattctcaattcat
ttgaagatgacacttcatattgtctccagatttcaaaacttcgatttcgtgtaaaggcagacaagattctgtcgaaggga
gagtcaccaattggaatcttgagcagtctttattcatcatttgtcttatgcaatctgcggaacaaagagtctctaaaacc
tttttgtaataaaagaatggtcccgtgccttcgtgttaagttctacaccttctttcggtctttgatggctctggtttttg
ctgctataattgcctcaccatggatcataagagttcttgtgtactatatgtatgaggaagcggaagtgtcagatcgcaag
gaactagccagtaagtacggactgacagacagatttaccggaaatatactcagattcttcactccactacatgccttctt
cttggtctgttatactgttttggttttggatgccatggttcttggggtagtgagtaaagaagtttcgaagacattgaaat
atatcatgcgtgaatgtttacgtgatatggcgaatagttctcgcgcacgcgctcttggatggtgtctgaagttattgcta
cagcccctgacacagtatggactttgtgggcttatcatcttgccactttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactggattatagcccttcctctagtagcggcaatgatagttttc
ttcatgctgccaacaattaacatgtttgtacgactggttatcaactttgcgatgttttgtggtcttcgagacatatcatg
tagtccgtgctcgcattgtatctcgaactgcaatgacaaattgtgcgagttactagacttaaaatatctcttcaagaaag
agagaataaggcgaccggaagctacaattagtcgaggagacagaagtattcaacttgcagcgggagctttttcccttata
agtctggtctcttttgcgtttttggccagtgaatgtataatatttatcgtggagtacacagtatttaccgtcatcggggt
tattctgaacgctgacattgcgttacaatatctcacagtcgttttaatgatatttttatacgcaagagattgcttcgtca
ctgtcaccaagaaatacgtggcatacaactccacacttcacgaggcagcggtggataggattgagaagaaactaatggaa
cacaacggtgaaaacaatgcgtacttactgccaacgaaaaaagaagaacagcaaaggttgcttgaactggtaatcgagaa
tgacaaactcaaatggaaaccgtggcaagtcattgcgttttacgacgaaaacgacaaattctacattacagaggaattct
tctttcaagctgtaaaccttgaaaactgtaattgccctggtccactctcaggaaatctcataaacgccacggctaaacta
ttagtaattattgtgttccttttctttgtggcgctgacagtgatggcatttggaaacgagtacgagatttccagcttcaa
ccagaccattgctaccgttattactggattcatcccctttgcactcacgaatttcctctttaaatcgaacgatatatctg
ctatagataaagatgatgctcatttcaacatccagctagatagaaaaatcagagatttcaatcaaacatggcgtgtgttg
gattttgatgttaattcgtactctaaaatatcaactgaacaacatagtagccataatgacagtgggcattcccaaggcga
tacgtcagaatcaattcctgaaaatgaaagttctccgatggtagacgaaatttttacgtgcgacatggaagttgggaatg
cgattgctggtcaacgttttgataatatcaaggtcagcaataaaaaggagctaatcattaatacaaccgatcaaatgttt
cattttatcaatattgattgtcttggttctgatgtgtaa

Protein
Protein IDpfu_aug2.0_452.1_07538.t1
Definition-
>pfu_aug2.0_452.1_07538.t1
MKRKKVQTPWMPCFKSERKITNMNKSLIQWLSILICIRMTQGQTAQVAPFSMTEPSCVITLDDPEDKTHLNGLSDNGAKL
VYVYFTNKGKDMQRNKTFSTKLYDPFTWARTSGTHGTGILRLDSAIVYITTLSIGVKEVKVNLTQTPNDCLSNLDDDTFQ
TVIRDFMLHDFVSRTENRTIPLQSDWKVCNMQIRKGDENEAEFYYECCHVSETGDIVCSELAKGFLMEVLIFIILFLNIA
AVLFAPLIIPSSCFKDKYNKVTFIHKLSKPMNLVVRKKAIVRHAEMGPNVVNKSSITRDECCMPNFEKILNSFEDDTSYC
LQISKLRFRVKADKILSKGESPIGILSSLYSSFVLCNLRNKESLKPFCNKRMVPCLRVKFYTFFRSLMALVFAAIIASPW
IIRVLVYYMYEEAEVSDRKELASKYGLTDRFTGNILRFFTPLHAFFLVCYTVLVLDAMVLGVVSKEVSKTLKYIMRECLR
DMANSSRARALGWCLKLLLQPLTQYGLCGLIILPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXWIIALPLVAAMIVFFMLPTINMFVRLVINFAMFCGLRDISCSPCSHCISNCNDKLCELLDLKYLFKKERIRRPEA
TISRGDRSIQLAAGAFSLISLVSFAFLASECIIFIVEYTVFTVIGVILNADIALQYLTVVLMIFLYARDCFVTVTKKYVA
YNSTLHEAAVDRIEKKLMEHNGENNAYLLPTKKEEQQRLLELVIENDKLKWKPWQVIAFYDENDKFYITEEFFFQAVNLE
NCNCPGPLSGNLINATAKLLVIIVFLFFVALTVMAFGNEYEISSFNQTIATVITGFIPFALTNFLFKSNDISAIDKDDAH
FNIQLDRKIRDFNQTWRVLDFDVNSYSKISTEQHSSHNDSGHSQGDTSESIPENESSPMVDEIFTCDMEVGNAIAGQRFD
NIKVSNKKELIINTTDQMFHFINIDCLGSDV
Protein IDpfu_aug2.0_452.1_07538.t2
Definition-
>pfu_aug2.0_452.1_07538.t2
MGMMNKSLIQWLSILICIRMTQGQTAQVAPFSMTEPSCVITLDDPEDKTHLNGLSDNGAKLVYVYFTNKGKDMQRNKTFS
TKLYDPFTWARTSGTHGTGILRLDSAIVYITTLSIGVKEVKVNLTQTPNDCLSNLDDDTFQTVIRDFMLHDFVSRTENRT
IPLQSDWKVCNMQIRKGDENEAEFYYECCHVSETGDIVCSELAKGFLMEVLIFIILFLNIAAVLFAPLIIPSSCFKDKYN
KVTFIHKLSKPMNLVVRKKAIVRHAEMGPNVVNKSSITRDECCMPNFEKILNSFEDDTSYCLQISKLRFRVKADKILSKG
ESPIGILSSLYSSFVLCNLRNKESLKPFCNKRMVPCLRVKFYTFFRSLMALVFAAIIASPWIIRVLVYYMYEEAEVSDRK
ELASKYGLTDRFTGNILRFFTPLHAFFLVCYTVLVLDAMVLGVVSKEVSKTLKYIMRECLRDMANSSRARALGWCLKLLL
QPLTQYGLCGLIILPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWIIALPLVAAMIVF
FMLPTINMFVRLVINFAMFCGLRDISCSPCSHCISNCNDKLCELLDLKYLFKKERIRRPEATISRGDRSIQLAAGAFSLI
SLVSFAFLASECIIFIVEYTVFTVIGVILNADIALQYLTVVLMIFLYARDCFVTVTKKYVAYNSTLHEAAVDRIEKKLME
HNGENNAYLLPTKKEEQQRLLELVIENDKLKWKPWQVIAFYDENDKFYITEEFFFQAVNLENCNCPGPLSGNLINATAKL
LVIIVFLFFVALTVMAFGNEYEISSFNQTIATVITGFIPFALTNFLFKSNDISAIDKDDAHFNIQLDRKIRDFNQTWRVL
DFDVNSYSKISTEQHSSHNDSGHSQGDTSESIPENESSPMVDEIFTCDMEVGNAIAGQRFDNIKVSNKKELIINTTDQMF
HFINIDCLGSDV

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Okinawa Institute of Science and Technology
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