Gene
| Gene Model ID | pfu_aug2.0_452.1_07542 |
|---|---|
| Locus | scaffold452.1 : 210422 ... 216303 : - |
| To GenomeBrowser | scaffold452.1:210422..216303 |
| Genes list of scaffold | scaffold452.1 |
| Synonym | pfu_aug1.0_16741.1_03753 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab-7l1 | GO:0003924 GO:0005525 GO:0005739 GO:0005802 GO:0006913 GO:0007030 GO:0008152 GO:0016020 GO:0019003 GO:0032438 GO:0032482 GO:0035526 GO:0042470 GO:0070062 GO:0090316 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_452.1_07542.t1 | 1 | 1 | Arf | 6 | 169 | 4.3e-14 | 52.1 | 4.2e-17 | 5.6e-14 | 51.7 |
| pfu_aug2.0_452.1_07542.t1 | 1 | 1 | Ras | 7 | 172 | 0.0 | 155.8 | 0.0 | 0.0 | 155.6 |
| pfu_aug2.0_452.1_07542.t1 | 1 | 1 | Miro | 7 | 126 | 2.1e-19 | 70.1 | 2.4e-22 | 3.2e-19 | 69.5 |
| pfu_aug2.0_452.1_07542.t1 | 1 | 1 | Gtr1_RagA | 7 | 140 | 1.2e-06 | 27.8 | 1.0e-09 | 1.4e-06 | 27.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_452.1_07542.t1 | gi|524912870|ref|XP_005111271.1| | PREDICTED: ras-related protein Rab-7L1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_452.1_07542.t1 | gi|676433168|ref|XP_009046812.1| | hypothetical protein LOTGIDRAFT_138291 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_452.1_07542.t1 | gi|242013254|ref|XP_002427327.1| | GTP-binding nuclear protein RAN1, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_452.1_07542.t1 | gi|193631807|ref|XP_001951808.1| | PREDICTED: ras-related protein Rab-7L1-like isoform X2 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_452.1_07542.t1 | gi|328716362|ref|XP_003245910.1| | PREDICTED: ras-related protein Rab-7L1-like isoform X1 [Acyrthosiphon pisum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_452.1_07542.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_452.1_07542.t1 atgtcagaggtgctatttaaagtcatcataatcggtgatcctacagtggggaaaacatcatttgtacagagatatgtcag cgattcttaccgcagggattataagatgacgattggggttgactttgccctaaaagttgtgaaatggtctgaaaatcaaa caatcaagctacagctctgggacattgctggccaggaaagattcacttcaatgaccagagtgtactacaaggacgcccat gcttgtatagttatgtttgacctcactcagaggtcaacgtttgccaatgccatcaaatggaaaaaagatctggaccaaaa atgctctcttcctgatgggtcatgtgtaccatgcttactcttagctaataagtgtgatctgagtcatagagaggtagatc agaacgagatagaggacatgtgtaaagaacacgactttgtgggctggacagaaacgtccgtcaaagaggggaaaatgata gacgagtctatgagatttttaatagaggagatgatgtcaaagcatgctgagtttgatggtttctctaacagtatgatggc gtccggtggcccaggaggggaaaagtaa |
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Protein
| Protein ID | pfu_aug2.0_452.1_07542.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_452.1_07542.t1 MSEVLFKVIIIGDPTVGKTSFVQRYVSDSYRRDYKMTIGVDFALKVVKWSENQTIKLQLWDIAGQERFTSMTRVYYKDAH ACIVMFDLTQRSTFANAIKWKKDLDQKCSLPDGSCVPCLLLANKCDLSHREVDQNEIEDMCKEHDFVGWTETSVKEGKMI DESMRFLIEEMMSKHAEFDGFSNSMMASGGPGGEK |
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