Gene
| Gene Model ID | pfu_aug2.0_452.1_07543 |
|---|---|
| Locus | scaffold452.1 : 217284 ... 219553 : + |
| To GenomeBrowser | scaffold452.1:217284..219553 |
| Genes list of scaffold | scaffold452.1 |
| Synonym | pfu_aug1.0_16741.1_03754 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_452.1_07543.t1 | 2 | 1 | DUF1751 | 21 | 36 | 4.4e-25 | 87.8 | 1.1 | 8000.0 | -2.8 |
| pfu_aug2.0_452.1_07543.t1 | 2 | 2 | DUF1751 | 52 | 147 | 4.4e-25 | 87.8 | 6.0e-29 | 4.4e-25 | 87.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_452.1_07543.t1 | gi|676467370|ref|XP_009057866.1| | hypothetical protein LOTGIDRAFT_105656 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_452.1_07543.t1 | gi|524882426|ref|XP_005097857.1| | PREDICTED: transmembrane protein 115-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_452.1_07543.t1 | gi|241238974|ref|XP_002401436.1| | membrane protein, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_452.1_07543.t1 | gi|340722232|ref|XP_003399512.1| | PREDICTED: transmembrane protein 115 [Bombus terrestris] | 0.0 |
| pfu_aug2.0_452.1_07543.t1 | gi|350396280|ref|XP_003484498.1| | PREDICTED: transmembrane protein 115 [Bombus impatiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_452.1_07543.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_452.1_07543.t1 atgcccatgatgaaaaacttgcagcaacaggcgtcgattgctgtaggaaatagctcagttgtcgtgaaaactgtcgccgt cttgttggttttcggatattttcttacatttatacattccataaccgatcacataactgttacacctggtcatttcgcct gggtgtggacctatgcatctcacagtttcatagaacttcatttctgggacgtcattattgacattgcagtcattatttta tgtggtaaactgttggagccattatggggtgctatggacatgcttatattttatgtggtagttacaacttttgttgctat agcaacacaatttctgtacctttcgctgtacatggtgacaaagaatgtagaatatttatttgacacccacatttgtggac aagctggatttattgcaggtttctccgtagctgttaaacaagtaatgccagatcacgttcttctagcatcaccttttgga aagttacgaaatacgcacattccgcttcttttactgatagttgcaattaccctgagactttgtcaacttctagaggggcc atatccatttatgttcgggtttggaatcctgataagttggatatatttgcggttctatcaaaaacatggaaacggcaata gaggtgacatgggagataactttagttttgctagcttctttcccagccagttacaacccattatatctattctctccaac acaatattcctggccttagtcaaagtaaagatctgtaagaagcctcagaggaagtatgacatcagttcctcgtccactat acagattacattaccaggcacagatccacaggatgctgaaagaaggagacaagtagccttaaaggcgttaaacgagagac tgagtaagtcagatcagggtccaaaatggccatcgttagacgatgaagaagcttctaagtcatcagaatcctcaggtgct gacgcgaagaaagtagagggaaaatcaaagtcagaatctgtagcgttacccatcccagacttcaaagaaaacaagaaaga actagaggagagcaaaacacaagattcatga |
|
Protein
| Protein ID | pfu_aug2.0_452.1_07543.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_452.1_07543.t1 MPMMKNLQQQASIAVGNSSVVVKTVAVLLVFGYFLTFIHSITDHITVTPGHFAWVWTYASHSFIELHFWDVIIDIAVIIL CGKLLEPLWGAMDMLIFYVVVTTFVAIATQFLYLSLYMVTKNVEYLFDTHICGQAGFIAGFSVAVKQVMPDHVLLASPFG KLRNTHIPLLLLIVAITLRLCQLLEGPYPFMFGFGILISWIYLRFYQKHGNGNRGDMGDNFSFASFFPSQLQPIISILSN TIFLALVKVKICKKPQRKYDISSSSTIQITLPGTDPQDAERRRQVALKALNERLSKSDQGPKWPSLDDEEASKSSESSGA DAKKVEGKSKSESVALPIPDFKENKKELEESKTQDS |
|