Gene
| Gene Model ID | pfu_aug2.0_453.1_10789 |
|---|---|
| Locus | scaffold453.1 : 1 ... 4625 : - |
| To GenomeBrowser | scaffold453.1:1..4625 |
| Genes list of scaffold | scaffold453.1 |
| Synonym | pfu_aug1.0_4311.1_01695 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_453.1_10789.t1 | 1 | 1 | Rft-1 | 55 | 230 | 1.9e-22 | 79.4 | 3.1e-26 | 2.3e-22 | 79.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_453.1_10789.t1 | gi|260837230|ref|XP_002613608.1| | hypothetical protein BRAFLDRAFT_93651 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_453.1_10789.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_453.1_10789.t1 atggaaacttctaccttaaaggcagataaagaagttgtagattcacacttgaaaaagcgtctcgtagacaaccctgaaga tttaacttcactgccacccagaaagaaagatgcacagcttggtgatggacatcagcaaaaaaatcgagagttactccttg gatctgcaaagtcagctacctacaatattttgctacagctttgtttgaggttaatgagttttttcctgaatgccgtagtt ttacaccatgtgtccacagatttgttaggagttgtcaatgtaaggcttcttttgctgtattcaacaacactattcatcag tacagaaggatttgaccaggcttgtctcagcaaactggaaaataaagactggagacaaattattaatcttagctggtgca cggtaccagtaagctgtttagtcagtggtgtattatccacggtgtggatatttttcctggaagctccagatccacacgag attccacattactatcttggtgttgtttcttacgccgcatccacaatcatcacatgtatagctaggccacacttcatagt gggtcaagcattcctgtgggtcaaactaagggtatcggctgtagctgtgtcggagctagtgagagttgtcattactgtag tgttagtccttcaattcccatggttaggaattgtatcattttccattgctcag |
|
Protein
| Protein ID | pfu_aug2.0_453.1_10789.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_453.1_10789.t1 METSTLKADKEVVDSHLKKRLVDNPEDLTSLPPRKKDAQLGDGHQQKNRELLLGSAKSATYNILLQLCLRLMSFFLNAVV LHHVSTDLLGVVNVRLLLLYSTTLFISTEGFDQACLSKLENKDWRQIINLSWCTVPVSCLVSGVLSTVWIFFLEAPDPHE IPHYYLGVVSYAASTIITCIARPHFIVGQAFLWVKLRVSAVAVSELVRVVITVVLVLQFPWLGIVSFSIAQ |
|