Gene
Gene Model ID | pfu_aug2.0_453.1_10789 |
---|---|
Locus | scaffold453.1 : 1 ... 4625 : - |
To GenomeBrowser | scaffold453.1:1..4625 |
Genes list of scaffold | scaffold453.1 |
Synonym | pfu_aug1.0_4311.1_01695 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_453.1_10789.t1 | 1 | 1 | Rft-1 | 55 | 230 | 1.9e-22 | 79.4 | 3.1e-26 | 2.3e-22 | 79.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_453.1_10789.t1 | gi|260837230|ref|XP_002613608.1| | hypothetical protein BRAFLDRAFT_93651 [Branchiostoma floridae] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_453.1_10789.t1 |
---|---|
Definition | - |
>pfu_aug2.0_453.1_10789.t1 atggaaacttctaccttaaaggcagataaagaagttgtagattcacacttgaaaaagcgtctcgtagacaaccctgaaga tttaacttcactgccacccagaaagaaagatgcacagcttggtgatggacatcagcaaaaaaatcgagagttactccttg gatctgcaaagtcagctacctacaatattttgctacagctttgtttgaggttaatgagttttttcctgaatgccgtagtt ttacaccatgtgtccacagatttgttaggagttgtcaatgtaaggcttcttttgctgtattcaacaacactattcatcag tacagaaggatttgaccaggcttgtctcagcaaactggaaaataaagactggagacaaattattaatcttagctggtgca cggtaccagtaagctgtttagtcagtggtgtattatccacggtgtggatatttttcctggaagctccagatccacacgag attccacattactatcttggtgttgtttcttacgccgcatccacaatcatcacatgtatagctaggccacacttcatagt gggtcaagcattcctgtgggtcaaactaagggtatcggctgtagctgtgtcggagctagtgagagttgtcattactgtag tgttagtccttcaattcccatggttaggaattgtatcattttccattgctcag |
Protein
Protein ID | pfu_aug2.0_453.1_10789.t1 |
---|---|
Definition | - |
>pfu_aug2.0_453.1_10789.t1 METSTLKADKEVVDSHLKKRLVDNPEDLTSLPPRKKDAQLGDGHQQKNRELLLGSAKSATYNILLQLCLRLMSFFLNAVV LHHVSTDLLGVVNVRLLLLYSTTLFISTEGFDQACLSKLENKDWRQIINLSWCTVPVSCLVSGVLSTVWIFFLEAPDPHE IPHYYLGVVSYAASTIITCIARPHFIVGQAFLWVKLRVSAVAVSELVRVVITVVLVLQFPWLGIVSFSIAQ |