Gene
Gene Model ID | pfu_aug2.0_453.1_10792 |
---|---|
Locus | scaffold453.1 : 37535 ... 70385 : - |
To GenomeBrowser | scaffold453.1:37535..70385 |
Genes list of scaffold | scaffold453.1 |
Synonym | pfu_aug1.0_8068.1_67792 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_453.1_10792.t1 | 2 | 1 | GDI | 1 | 284 | 0.0 | 429.8 | 0.0 | 0.0 | 426.3 |
pfu_aug2.0_453.1_10792.t1 | 2 | 2 | GDI | 276 | 294 | 0.0 | 429.8 | 0.00031 | 4.5 | 5.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_453.1_10792.t1 | gi|241273677|ref|XP_002406620.1| | GDI-1 GDP dissociation inhibitor, putative [Ixodes scapularis] | 0.0 |
pfu_aug2.0_453.1_10792.t1 | gi|391330910|ref|XP_003739894.1| | PREDICTED: rab GDP dissociation inhibitor beta [Metaseiulus occidentalis] | 0.0 |
pfu_aug2.0_453.1_10792.t1 | gi|498960712|ref|XP_004524684.1| | PREDICTED: rab GDP dissociation inhibitor alpha [Ceratitis capitata] | 0.0 |
pfu_aug2.0_453.1_10792.t1 | gi|751476603|ref|XP_011193793.1| | PREDICTED: rab GDP dissociation inhibitor alpha [Bactrocera cucurbitae] | 0.0 |
pfu_aug2.0_453.1_10792.t1 | gi|751770237|ref|XP_011198165.1| | PREDICTED: rab GDP dissociation inhibitor alpha [Bactrocera dorsalis] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_453.1_10792.t1 |
---|---|
Definition | - |
>pfu_aug2.0_453.1_10792.t1 atgatgtccgtcagtggcaagaaagtcctacacatggatagaaacaaatattatggagcagaaattgcctcattatcccc tcttgaagactgttttgctcattttaagagggaagcaccagcaaaggaacagtatggaagaggtcgggactggaatgttg accttattcctaaatttctcatggcaaatgggcagctagttaaattacttatacacacaggagttacaaggtatttagag ttcaaaagtgtggatggaagctatgtctataaaggtgggaaaatcttcaaagttcctgccgatgagaaggaagctttagc tacatctctaatgggcttatttgagaaaagacggtttaagaattttcttcagtttgcacaagaatttgacatagatgacc caaaaacctataaaggcgtagatgcaaaaacaacgacagcagctgacgtatataaaaaatttgggctcgatgggaataca caggactttacaggacatgctatctctctttaccgtgatgatgactatatgagccaaccatgtggagagctacttcggag gatgaaactttacagtgaatccttagctagatatggcaagtcaccatacctctaccccctgtatggtttgggagagctgc ctcagggatttgccaggctcagtgcaatatatagtggaacatttatgttggacagaccaggaacaacaattgagtttgaa gaaggtcgtgtagtaggagtaaaagataatgaagggaatctggcaaagtgcaaacaggtcatttgtgatccgtcatattc tcccgaaaagtgcaaacctgttggcaaggtacatatttatataagtgtggttagttatgcccataatgtagcagccaagg atggtacttggccattgtcagtacaacggcagagaccccagatcctgaaaaggaattag |
Protein
Protein ID | pfu_aug2.0_453.1_10792.t1 |
---|---|
Definition | - |
>pfu_aug2.0_453.1_10792.t1 MMSVSGKKVLHMDRNKYYGAEIASLSPLEDCFAHFKREAPAKEQYGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLE FKSVDGSYVYKGGKIFKVPADEKEALATSLMGLFEKRRFKNFLQFAQEFDIDDPKTYKGVDAKTTTAADVYKKFGLDGNT QDFTGHAISLYRDDDYMSQPCGELLRRMKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYSGTFMLDRPGTTIEFE EGRVVGVKDNEGNLAKCKQVICDPSYSPEKCKPVGKVHIYISVVSYAHNVAAKDGTWPLSVQRQRPQILKRN |