Gene
| Gene Model ID | pfu_aug2.0_453.1_10793 |
|---|---|
| Locus | scaffold453.1 : 73146 ... 91764 : + |
| To GenomeBrowser | scaffold453.1:73146..91764 |
| Genes list of scaffold | scaffold453.1 |
| Synonym | pfu_aug1.0_22516.1_40369 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase rnf123-like | GO:0008152 GO:0008270 GO:0016874 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_453.1_10793.t1 | 1 | 1 | SPRY | 97 | 189 | 3.4e-18 | 65.9 | 5.6e-22 | 4.2e-18 | 65.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_453.1_10793.t1 | gi|585698006|ref|XP_006822492.1| | PREDICTED: E3 ubiquitin-protein ligase RNF123-like [Saccoglossus kowalevskii] | 8.00001e-41 |
| pfu_aug2.0_453.1_10793.t1 | gi|383853762|ref|XP_003702391.1| | PREDICTED: E3 ubiquitin-protein ligase RNF123 isoform X1 [Megachile rotundata] | 2.0e-40 |
| pfu_aug2.0_453.1_10793.t1 | gi|449663770|ref|XP_004205802.1| | 4.00001e-40 | |
| pfu_aug2.0_453.1_10793.t1 | gi|755967420|ref|XP_011305831.1| | PREDICTED: E3 ubiquitin-protein ligase RNF123-like [Fopius arisanus] | 7.0e-40 |
Transcript
| Transcript ID | pfu_aug2.0_453.1_10793.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_453.1_10793.t1 atggccgagagacaaaaaattcaggctgcaggaacgtcaacaggagatacaaggacatactcaattttgcagcgagtgtt ctccgatagaagtctgcaggaagaggctagtgcactgccaacgaaaaatttggagttaagtacgttacatagcttcatcg aaaaatctacagcagaagtggtcacaaagtcttctccttgctcaagtaaaggtatgtggtataaagtattgttacagcca caggtcacagtaactttagcaccattagagctaattgctgtgtctacagaggaaggtgtaggggacactaaggactccta ttcatacgacggcagcaggttacggaaatggaacgtaaaaactcggaaatacggagaggcctggttagcaggggatgtta tatcatgtgccatagactgtgatgagggcattatatctttctacaggaatgggaagtgtatgggtgaagctttcaggggc attaaagttggagcagggtacgcttacttcccgactgtcagtttgtcacggtccgaaaacttacgtgttaacttcggtca aactccactcagatatcctttgaagctgtaa |
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Protein
| Protein ID | pfu_aug2.0_453.1_10793.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_453.1_10793.t1 MAERQKIQAAGTSTGDTRTYSILQRVFSDRSLQEEASALPTKNLELSTLHSFIEKSTAEVVTKSSPCSSKGMWYKVLLQP QVTVTLAPLELIAVSTEEGVGDTKDSYSYDGSRLRKWNVKTRKYGEAWLAGDVISCAIDCDEGIISFYRNGKCMGEAFRG IKVGAGYAYFPTVSLSRSENLRVNFGQTPLRYPLKL |
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