Gene
| Gene Model ID | pfu_aug2.0_453.1_10796 |
|---|---|
| Locus | scaffold453.1 : 135618 ... 150675 : - |
| To GenomeBrowser | scaffold453.1:135618..150675 |
| Genes list of scaffold | scaffold453.1 |
| Synonym | pfu_aug1.0_20123.1_33070 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| betaine--homocysteine s-methyltransferase 1-like | GO:0008152 GO:0008172 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_453.1_10796.t1 | 1 | 1 | DUF4371 | 61 | 213 | 1.3e-30 | 106.6 | 6.1e-34 | 2.3e-30 | 105.9 |
| pfu_aug2.0_453.1_10796.t1 | 1 | 1 | S-methyl_trans | 618 | 886 | 1.3e-28 | 100.2 | 7.3e-32 | 2.7e-28 | 99.1 |
Transcript
| Transcript ID | pfu_aug2.0_453.1_10796.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_453.1_10796.t1 atggacagaggatcaggacccagtcttcccgcatcagatttgtacagggctcagcacggagtcccgtcttcccgcttggc cagtaagcaactttggaaaagatgctggtacaaaactgaagaatattccagtaccatgctcaatgttttgtctgatgaca tcaggctcacatcctcgcagacgaaacanacggaggatcgaagtaacttctttgcgctccttcatctttgtgctaagtct gatgaagttttggctgatcatctagcgaatgcagctgacaactcaaaatatacatcgcccgatatacaaaacgaattaat tgaaatctgtggtaaagaagttaaagaagttcttctaaaggaatgccgggaggcaccatattttgccctattagcagacg aaacaactgacaagtcaacaagagttcagttgtctgtttgtgtgcgctatgtcgaaatctcagatgaagctgtgtttgtt aaagaaacgttcttaggctttgtccatgcccataaaacggacggagaaacgatagcaaacttactcttcgaatttctcga aatgaacaatctatgcactgataaactaagggcccagggttatgatggcgcgggaaatatgtcagggaagcataatggag tgcaggctagggtcaaggcagttgctccagatgcagtgtatgtgcattgtaaggcgcattgtttgaatctggcgatcgta cacgcatgcaaaattccttgtgttcggacattgatggccacggtccaggaggttgggtttgcctttgactatagtgctaa gagactggaagcatatcttgacgagttgtcagcgaatgatgatgtacaggcggctatggacaagaagacgaagctccaga ctctctgtgaaacccgttgggtgagtcggtccgatgcgctgaccacattcaaacatgcgtttcctgttgtcgtccattcc ctggaaaacctcaatcaggattcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaacg cacagatgatgaggtttggaatgctttgttccaagaagcagtggatctggcacaggctttcgacattcaaccttgtatcc caaggcgagcaggcagacagcaacacaggaacaacgctcctgccgacacaccaagtgaatactggaaagtcacattgtac aatgtctttgtggaccatcttctaatggaattagaagagaggcttattgttgcagaaccaaaattcaaggccttcaatct tctaccgagaaaagtgaacgagtttgacgaagagcattttaacgtcacatttgatgcttataatgccgacatcatcggcg atcgtgacgactttcgggctgaagtacaaagatggacactccgatggaacatggccgcacacaaacccgtgtctgtttgt gacacgattaagtgcacaaacagacatctctatccctcagtattcaacgtgttggtggctctccttaccatccccgtttc caccgctaccgctgagcgcagattggttgagcgtttaagggatggagacagtttggttgttgctgagggttacattttcg aattcgagcggaaaggctacttaaaggccggaagctttgttccggaagtggttgtggaacatcctgaacttgtgcgcgct cagcatttggaatatgtacatgccggaagtgacgttgttctagcattcacgtattatgcccacagagaaaagctaagact aattggacgagagaatgatattgaagcagttaatatgaaagctttgaaaatagctcgtgaagtggcagacgagacaggca cattaatggcgggaaacatctgtaatacaactgtttacatgagagacaacccagaagccatacagaaagcaaggggaatg aataaggagcagattgaatgggcagtgaaaggaggagccgattttattctcggagagacgtacatggagtttggagaagc aatgctagctttagaatgtataaaagaatatggaaacggtcttcctgctgttataactttatccgcctcgatgactgacg tattacacgacggcgtaccaatcgacgaagcatgccggaagttggaggacgcaggcgcagcggttgttggtctcaactgt gggcgtggtcctaaaacgatgttagatagtctcagacttgtcaaagcagcttgcaagggtcctatagcagccttgccggt gccataccgtaccacacctgaacagcccaccttcttctctctgactgtcccttacacagataaaaaggcttttcctttag acctgcaatcctgccaatgttctcgagaggagatttataattttgctactgaatgtaaaactatggggatccagtacgtc ggtttgtgttgtggaaactcatctaaccttctcagaatctttgcggaagtgtatggaaagcctgcgcctgcgcttcaata ttcaccggaaatggagaaacattacatattcggtgacaagaagaagtttaacagctacttcacggttactcgtaaagcag gcctaacgggaaaacaaccatcctga |
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Protein
| Protein ID | pfu_aug2.0_453.1_10796.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_453.1_10796.t1 MDRGSGPSLPASDLYRAQHGVPSSRLASKQLWKRCWYKTEEYSSTMLNVLSDDIRLTSSQTKXTEDRSNFFALLHLCAKS DEVLADHLANAADNSKYTSPDIQNELIEICGKEVKEVLLKECREAPYFALLADETTDKSTRVQLSVCVRYVEISDEAVFV KETFLGFVHAHKTDGETIANLLFEFLEMNNLCTDKLRAQGYDGAGNMSGKHNGVQARVKAVAPDAVYVHCKAHCLNLAIV HACKIPCVRTLMATVQEVGFAFDYSAKRLEAYLDELSANDDVQAAMDKKTKLQTLCETRWVSRSDALTTFKHAFPVVVHS LENLNQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXERTDDEVWNALFQEAVDLAQAFDIQPCIPRRAGRQQHRNNAPADTPSEYWKVTLY NVFVDHLLMELEERLIVAEPKFKAFNLLPRKVNEFDEEHFNVTFDAYNADIIGDRDDFRAEVQRWTLRWNMAAHKPVSVC DTIKCTNRHLYPSVFNVLVALLTIPVSTATAERRLVERLRDGDSLVVAEGYIFEFERKGYLKAGSFVPEVVVEHPELVRA QHLEYVHAGSDVVLAFTYYAHREKLRLIGRENDIEAVNMKALKIAREVADETGTLMAGNICNTTVYMRDNPEAIQKARGM NKEQIEWAVKGGADFILGETYMEFGEAMLALECIKEYGNGLPAVITLSASMTDVLHDGVPIDEACRKLEDAGAAVVGLNC GRGPKTMLDSLRLVKAACKGPIAALPVPYRTTPEQPTFFSLTVPYTDKKAFPLDLQSCQCSREEIYNFATECKTMGIQYV GLCCGNSSNLLRIFAEVYGKPAPALQYSPEMEKHYIFGDKKKFNSYFTVTRKAGLTGKQPS |
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