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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_4539.1_32680
Locus scaffold4539.1 : 39498 ... 40081 : -
To GenomeBrowser scaffold4539.1:39498..40081
Genes list of scaffold scaffold4539.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_4539.1_32680.t1 1 1 p450 8 107 7.7e-32 110.4 6.0e-36 8.9e-32 110.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_4539.1_32680.t1 gi|260794699|ref|XP_002592345.1| hypothetical protein BRAFLDRAFT_240185 [Branchiostoma floridae] 3.0e-26

Transcript
Transcript IDpfu_aug2.0_4539.1_32680.t1
Definition-
>pfu_aug2.0_4539.1_32680.t1
aaggaaattttattttcttcacaggcggatatgacataccaaaaggtacaacggtatccataaatatctgggctctacac
aacgataaaaactactggaaggatgttaataaattcaacccatatcggtttttagacaaagatggaaaactaaataccac
gcctactaattggctacctttctcattgggaagtagggtgtgtctaggagagcccgtcgccaggatagagtttgtactta
ttgtgtcaaatctattacaaacatttacctttaaaccacctcatggtatgcattacaagatcgacattcggtatcctttt
ctaggatccgaacaacccgccgaatataaagttatgattgaaaagcgaagatga

Protein
Protein IDpfu_aug2.0_4539.1_32680.t1
Definition-
>pfu_aug2.0_4539.1_32680.t1
GNFIFFTGGYDIPKGTTVSINIWALHNDKNYWKDVNKFNPYRFLDKDGKLNTTPTNWLPFSLGSRVCLGEPVARIEFVLI
VSNLLQTFTFKPPHGMHYKIDIRYPFLGSEQPAEYKVMIEKRR

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