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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_456.1_20795
Locus scaffold456.1 : 145309 ... 188563 : +
To GenomeBrowser scaffold456.1:145309..188563
Genes list of scaffold scaffold456.1
Synonym pfu_aug1.0_1195.1_58406

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_456.1_20795.t1 gi|524906108|ref|XP_005108398.1| PREDICTED: calcium uptake protein 3, mitochondrial-like [Aplysia californica] 0.0
pfu_aug2.0_456.1_20795.t1 gi|676440688|ref|XP_009049256.1| hypothetical protein LOTGIDRAFT_230996 [Lottia gigantea] 2.0e-40
pfu_aug2.0_456.1_20795.t1 gi|551518991|ref|XP_005810991.1| PREDICTED: calcium uptake protein 3, mitochondrial-like [Xiphophorus maculatus] 8.0e-36
pfu_aug2.0_456.1_20795.t1 gi|658870034|ref|XP_008417919.1| PREDICTED: calcium uptake protein 3, mitochondrial isoform X3 [Poecilia reticulata] 2.0e-35
pfu_aug2.0_456.1_20795.t1 gi|617408996|ref|XP_007554804.1| PREDICTED: calcium uptake protein 3, mitochondrial-like isoform X3 [Poecilia formosa] 7.0e-35

Transcript
Transcript IDpfu_aug2.0_456.1_20795.t1
Definition-
>pfu_aug2.0_456.1_20795.t1
atggctgccacattgaagagttcgactaaactcctgagagttttacgacgaaatattgaagaatgtaggaagttttcgac
aaaaaaatataacctaacatactcaagagcggttgctatatttgctgtacctactacgggactagcagcatggctttatt
ggcggaaaagactgaaacatgaaagtcctgtttacgcagcgagtgcagcagaggtgcaggtgagtaatggacacgatctc
aacagaacccaagccaggataggtcggcgaacactggtaaaggatgaagtagagaaatggttgaagtacaccccctcccg
ccgccgagggaacaccaagctgtttaggaatctccatgatcaaggacttatctcgtacaccgagtacctattccttctgt
gtgttcttaccaagctgaaactgtctgagagtaagaagaagaaaaaaaaccatcagactactagagtgtcgcgtaagcca
cagtctgggttcagaattgccttcaacatgtttgatactgatggtaaccagattgttgacaaaaaggaatttcttgtgtt
ggaatcattcttcaccctcccccctacggaaagaaaatttgtaccccgagaaaaacaaaaaatacaagaattattagatc
tggagcaagttttcagcaaagaacaaactcaagaacaaaagagcataaaagaacatgacaaatctgtggacccagtacag
gatactacattacttgtacatttctttggaaacaagggaaaagatgtactgaagtatgaggactttcacaggcataagtc
taccagcaagtgtgatgttggaaatttgattatccctcaatag

Protein
Protein IDpfu_aug2.0_456.1_20795.t1
Definition-
>pfu_aug2.0_456.1_20795.t1
MAATLKSSTKLLRVLRRNIEECRKFSTKKYNLTYSRAVAIFAVPTTGLAAWLYWRKRLKHESPVYAASAAEVQVSNGHDL
NRTQARIGRRTLVKDEVEKWLKYTPSRRRGNTKLFRNLHDQGLISYTEYLFLLCVLTKLKLSESKKKKKNHQTTRVSRKP
QSGFRIAFNMFDTDGNQIVDKKEFLVLESFFTLPPTERKFVPREKQKIQELLDLEQVFSKEQTQEQKSIKEHDKSVDPVQ
DTTLLVHFFGNKGKDVLKYEDFHRHKSTSKCDVGNLIIPQ

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