Gene
| Gene Model ID | pfu_aug2.0_456.1_20796 |
|---|---|
| Locus | scaffold456.1 : 188619 ... 198525 : + |
| To GenomeBrowser | scaffold456.1:188619..198525 |
| Genes list of scaffold | scaffold456.1 |
| Synonym | pfu_aug1.0_1195.1_58405 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcium uptake protein mitochondrial-like | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_456.1_20796.t1 | 1 | 1 | EF-hand_8 | 9 | 58 | 2.8e-11 | 42.8 | 1.3e-14 | 3.8e-11 | 42.4 |
| pfu_aug2.0_456.1_20796.t1 | 2 | 1 | EF-hand_1 | 9 | 18 | 1.5e-08 | 33.2 | 0.055 | 160.0 | 1.9 |
| pfu_aug2.0_456.1_20796.t1 | 2 | 1 | EF-hand_5 | 9 | 17 | 4.2e-08 | 32.1 | 0.0072 | 21.0 | 4.6 |
| pfu_aug2.0_456.1_20796.t1 | 2 | 1 | EF-hand_6 | 9 | 17 | 2.1e-07 | 30.2 | 0.33 | 980.0 | 0.1 |
| pfu_aug2.0_456.1_20796.t1 | 2 | 2 | EF-hand_1 | 32 | 57 | 1.5e-08 | 33.2 | 9.2e-11 | 2.7e-07 | 29.3 |
| pfu_aug2.0_456.1_20796.t1 | 2 | 2 | EF-hand_6 | 32 | 57 | 2.1e-07 | 30.2 | 4.2e-10 | 1.2e-06 | 27.8 |
| pfu_aug2.0_456.1_20796.t1 | 2 | 2 | EF-hand_5 | 33 | 53 | 4.2e-08 | 32.1 | 1.5e-09 | 4.6e-06 | 25.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_456.1_20796.t1 | gi|391340792|ref|XP_003744720.1| | PREDICTED: EF-hand domain-containing family member A2-like [Metaseiulus occidentalis] | 7.0e-32 |
| pfu_aug2.0_456.1_20796.t1 | gi|195358291|ref|XP_002045191.1| | GM13268 [Drosophila sechellia] | 1.0e-30 |
| pfu_aug2.0_456.1_20796.t1 | gi|585692839|ref|XP_006821524.1| | PREDICTED: calcium uptake protein 3, mitochondrial-like [Saccoglossus kowalevskii] | 7.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_456.1_20796.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_456.1_20796.t1 atgtacacctacgcagaacaacctgtctccaaagaggagtttcagcgagcagtgtacgtgtgtacagggttcacattcag tccccacttggtcaacaccgtgtttcatattttcgacactgacggtgatggccatcttagccataaggagtttatctcta tcatgaaagatcggctacataggggatccaggatgaagaaaggaccagcacacctaatgcactcacaggattggtgggga tcctataaatcctgtgtaaggaacgaaatgaaatcctattcctaa |
|
Protein
| Protein ID | pfu_aug2.0_456.1_20796.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_456.1_20796.t1 MYTYAEQPVSKEEFQRAVYVCTGFTFSPHLVNTVFHIFDTDGDGHLSHKEFISIMKDRLHRGSRMKKGPAHLMHSQDWWG SYKSCVRNEMKSYS |
|