Gene
| Gene Model ID | pfu_aug2.0_456.1_20797 |
|---|---|
| Locus | scaffold456.1 : 201627 ... 206328 : - |
| To GenomeBrowser | scaffold456.1:201627..206328 |
| Genes list of scaffold | scaffold456.1 |
| Synonym | pfu_aug1.0_6075.1_16837 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| chymotrypsin-like protease ctrl-1 | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_456.1_20797.t2 | 1 | 1 | Trypsin | 4 | 90 | 8.8e-17 | 61.4 | 6.4e-21 | 9.4e-17 | 61.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_456.1_20797.t2 | gi|512932191|ref|XP_004907109.1| | 3.0e-15 | |
| pfu_aug2.0_456.1_20797.t2 | gi|472347396|ref|XP_004393420.1| | 3.0e-15 | |
| pfu_aug2.0_456.1_20797.t2 | gi|507623994|ref|XP_004626050.1| | 3.0e-15 | |
| pfu_aug2.0_456.1_20797.t2 | gi|731284178|ref|XP_010610582.1| | PREDICTED: chymotrypsin-like protease CTRL-1 [Fukomys damarensis] | 3.0e-15 |
| pfu_aug2.0_456.1_20797.t2 | gi|511840037|ref|XP_004744525.1| | PREDICTED: chymotrypsin-like protease CTRL-1 [Mustela putorius furo] | 4.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_456.1_20797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_456.1_20797.t1 atggcttccagtcatgattgtggctttaatttgtttgagcatcagccttattcacctgatcttgctccatcagactttca tctattcccaacactaaaagcagctatttcttgcacccacgttcagtccgatgatgacgtcatacttgcagtggatggct ttcagaccagtcaagataaggagttcttgaaacatggcattgaggccctcaaaatggcatgctgtaaacgcacggatgga attggttctgaatcagtggatccaaaacctgcgggacgcattattggcggcagcgaatcgacgccacattactggcgctt tatggcgtcaatccagtacaccaatggattccatttctgtggtggtgcgttgatcacaccagattgggtgctgactgcag ctcattgtgtggaaaatatggggccatcacagttgcggacagtgtttggtgaacattctttgttcatatcggagggaaca gaacaagttctggatgtcaaatcaattcacctgcaccctgactttatgtactacatgccatacgatctggctttgttaga gcttaaccagtctgcagtcatcgataaagactatgtcaacactatagacctacccgcgggctgtgagggattcctgggcc agatgtgtacaatcatagggtggggcaaaaacgatccaaaacttccagatggcacagggtccgagttccttcaggaatcc caggtgactgtgctaggagtagacagttgtaggaacacgtggggaaactttatatactatggcactgtgtgcgtcttcac atatggtgtcactccttgtgcgggtgacagtggcggtccattggtatgtcttgatgatggttatcgtttcgttttggcgg gagtttcctcgtggggcgacaatggcacaggatcggagtttctacaggaatcccaggtgacggtcctaggagtggacagt tgtaggaacacgtggggagactttatctactatggtacggtctgtgtcttcacgtacggtgtcactccatgctcgggtga cagtggcggtccattgttatgtcttgatgatggttatcgattcgtcttggtgggagtttcctcgtggggcgacagcgagt gcgggaatcacccagccatctacagcaaagtgtctgagcaccttggatggatacatgatgttaccaaaatgtcacaatag |
|
| Transcript ID | pfu_aug2.0_456.1_20797.t2 |
| Definition | - |
>pfu_aug2.0_456.1_20797.t2 atggcacaggatcggagtttctacaggaatcccaggtgacggtcctaggagtggacagttgtaggaacacgtggggagac tttatctactatggtacggtctgtgtcttcacgtacggtgtcactccatgctcgggtgacagtggcggtccattgttatg tcttgatgatggttatcgattcgtcttggtgggagtttcctcgtggggcgacagcgagtgcgggaatcacccagccatct acagcaaagtgtctgagcaccttggatggatacatgatgttaccaaaatgtcacaatag |
|
Protein
| Protein ID | pfu_aug2.0_456.1_20797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_456.1_20797.t1 MASSHDCGFNLFEHQPYSPDLAPSDFHLFPTLKAAISCTHVQSDDDVILAVDGFQTSQDKEFLKHGIEALKMACCKRTDG IGSESVDPKPAGRIIGGSESTPHYWRFMASIQYTNGFHFCGGALITPDWVLTAAHCVENMGPSQLRTVFGEHSLFISEGT EQVLDVKSIHLHPDFMYYMPYDLALLELNQSAVIDKDYVNTIDLPAGCEGFLGQMCTIIGWGKNDPKLPDGTGSEFLQES QVTVLGVDSCRNTWGNFIYYGTVCVFTYGVTPCAGDSGGPLVCLDDGYRFVLAGVSSWGDNGTGSEFLQESQVTVLGVDS CRNTWGDFIYYGTVCVFTYGVTPCSGDSGGPLLCLDDGYRFVLVGVSSWGDSECGNHPAIYSKVSEHLGWIHDVTKMSQ |
|
| Protein ID | pfu_aug2.0_456.1_20797.t2 |
| Definition | - |
>pfu_aug2.0_456.1_20797.t2 GTGSEFLQESQVTVLGVDSCRNTWGDFIYYGTVCVFTYGVTPCSGDSGGPLLCLDDGYRFVLVGVSSWGDSECGNHPAIY SKVSEHLGWIHDVTKMSQ |
|