Gene
| Gene Model ID | pfu_aug2.0_456.1_20798 |
|---|---|
| Locus | scaffold456.1 : 221659 ... 252446 : + |
| To GenomeBrowser | scaffold456.1:221659..252446 |
| Genes list of scaffold | scaffold456.1 |
| Synonym | pfu_aug1.0_3981.1_16235 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vascular endothelial growth factor receptor 3 | GO:0004713 GO:0005524 GO:0018108 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_456.1_20798.t1 | 7 | 1 | Ig_3 | 58 | 141 | 1.5e-13 | 51.0 | 1.8e-05 | 0.026 | 15.0 |
| pfu_aug2.0_456.1_20798.t1 | 8 | 1 | Ig_2 | 59 | 148 | 2.9e-21 | 75.3 | 9.6e-05 | 0.14 | 12.2 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 1 | I-set | 109 | 140 | 1.0e-19 | 70.1 | 0.029 | 43.0 | 4.0 |
| pfu_aug2.0_456.1_20798.t1 | 8 | 2 | Ig_2 | 223 | 251 | 2.9e-21 | 75.3 | 0.66 | 980.0 | -0.1 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 2 | I-set | 272 | 360 | 1.0e-19 | 70.1 | 3.0e-07 | 0.00044 | 20.0 |
| pfu_aug2.0_456.1_20798.t1 | 8 | 3 | Ig_2 | 273 | 360 | 2.9e-21 | 75.3 | 0.00022 | 0.32 | 11.1 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 2 | Ig_3 | 278 | 352 | 1.5e-13 | 51.0 | 0.0013 | 1.9 | 9.0 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 3 | Ig_3 | 396 | 462 | 1.5e-13 | 51.0 | 0.0054 | 7.9 | 7.0 |
| pfu_aug2.0_456.1_20798.t1 | 8 | 4 | Ig_2 | 398 | 471 | 2.9e-21 | 75.3 | 0.00021 | 0.31 | 11.1 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 3 | I-set | 402 | 475 | 1.0e-19 | 70.1 | 2.2e-08 | 3.3e-05 | 23.6 |
| pfu_aug2.0_456.1_20798.t1 | 8 | 5 | Ig_2 | 496 | 570 | 2.9e-21 | 75.3 | 0.014 | 20.0 | 5.3 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 4 | Ig_3 | 500 | 569 | 1.5e-13 | 51.0 | 0.00018 | 0.27 | 11.7 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 4 | I-set | 558 | 581 | 1.0e-19 | 70.1 | 0.37 | 550.0 | 0.5 |
| pfu_aug2.0_456.1_20798.t1 | 8 | 6 | Ig_2 | 603 | 677 | 2.9e-21 | 75.3 | 0.014 | 21.0 | 5.2 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 5 | Ig_3 | 607 | 676 | 1.5e-13 | 51.0 | 0.00011 | 0.16 | 12.4 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 5 | I-set | 665 | 688 | 1.0e-19 | 70.1 | 0.34 | 500.0 | 0.6 |
| pfu_aug2.0_456.1_20798.t1 | 8 | 7 | Ig_2 | 702 | 797 | 2.9e-21 | 75.3 | 1.1e-05 | 0.017 | 15.2 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 6 | Ig_3 | 745 | 777 | 1.5e-13 | 51.0 | 0.032 | 48.0 | 4.5 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 6 | I-set | 753 | 779 | 1.0e-19 | 70.1 | 0.011 | 16.0 | 5.4 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 7 | I-set | 815 | 850 | 1.0e-19 | 70.1 | 4.4e-06 | 0.0065 | 16.2 |
| pfu_aug2.0_456.1_20798.t1 | 8 | 8 | Ig_2 | 815 | 854 | 2.9e-21 | 75.3 | 1.0e-05 | 0.015 | 15.3 |
| pfu_aug2.0_456.1_20798.t1 | 7 | 7 | Ig_3 | 824 | 850 | 1.5e-13 | 51.0 | 0.0035 | 5.2 | 7.6 |
| pfu_aug2.0_456.1_20798.t1 | 1 | 1 | Pkinase_Tyr | 973 | 1277 | 0.0 | 304.4 | 0.0 | 0.0 | 303.8 |
| pfu_aug2.0_456.1_20798.t1 | 2 | 1 | Pkinase | 974 | 1071 | 2.8e-40 | 138.1 | 1.8e-13 | 2.7e-10 | 39.8 |
| pfu_aug2.0_456.1_20798.t1 | 2 | 2 | Pkinase | 1118 | 1276 | 2.8e-40 | 138.1 | 1.2e-30 | 1.8e-27 | 96.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_456.1_20798.t1 | gi|676490921|ref|XP_009065427.1| | hypothetical protein LOTGIDRAFT_132723 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_456.1_20798.t1 | gi|524883150|ref|XP_005098208.1| | PREDICTED: vascular endothelial growth factor receptor 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_456.1_20798.t1 | gi|701397865|ref|XP_009968148.1| | PREDICTED: vascular endothelial growth factor receptor 3 [Tyto alba] | 0.0 |
| pfu_aug2.0_456.1_20798.t1 | gi|573888718|ref|XP_006632127.1| | PREDICTED: LOW QUALITY PROTEIN: vascular endothelial growth factor receptor 3-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_456.1_20798.t1 | gi|705693102|ref|XP_010123020.1| | PREDICTED: vascular endothelial growth factor receptor 3 [Chlamydotis macqueenii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_456.1_20798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_456.1_20798.t1 atgtattatctcgtcccgacacataaaggaactttacgttacattttattggctgtcctttactttacctgtgttgtgtc ccaagatggtgcatttagcggattgaacccaaaacccgacatctttgtttaccccgacctatctgggaacgagaccgagg aatctagccctatcaacgtacatgagaacgagctggtggtggacagtggcgacaccttcactattgagtgttttggtgga taccccatgacactcgtcatcaaacgaggaaaagacatcggaaacaaggccaataattatgacagactaaaggtggagga gagaccagtgtctaataatactaacaccaacaggccgtatggcagtatctttgtcatcagtaacactgactacacctaca ctggggaatacacctgccagtacatacagaacaaactcagctctagtatctatgtctatgtgagagatgagaagaagcta cttgcaccatttggaggaacatttcccccaaacattcctatctatccaatgcttgtgtatcattatcgtgagacggctat cagatgtcgacccacagacccctcagtgaatatgacgttaataaagatcaacggtccccagtatataatcctaaagacag gagacgaacacgccatattgtatgatcctcatcggggatttatactacagtatcctaacgctttcttcagtggattattc agatgtattgctgagagggacaccactacagacagactgactttccagttaacttatttaagagctacatcccctcccat gccgtattttacaccagcatctgacatggtagttgagatcggtagcacctttgagatatactgtaatgtaaaagttgaca aaggagtgaagattcacttcaactggtcctattcatccaatgagaattcagaccgggtgcgttacacacgacctataaga gaccctgtacagacacagtttgcctatgaccatatctacagtaaattgactgtgatgaatgcaggaaagaaagacgaggg cgtgtaccgatgtataactacaacacatgacgggaaatcaaagcctatcgaaaaacttgtctatatacaagatgaaccag ttctaattattggtgaatacagcatctccagtccatcctacagtacaaatgggctcttttacactgtggaagggcaagga aatgtcacaataataaacaccgtagaagcgttcccgagctttaatgttacatggtatttgaatggtgctcccatcagaat agggggaaaagaatataatgaaacaaagattgagagtgaatatggtatcagaatagctaaagctgcccatcaccacagag gaaattatactgcagttctgtcaaatggttttgagtggaagagcaaaagcttctatttggttgtaaaatatgcacctgca gtaacaatacaatcgtctaaggttatgatggacaaatattacatgattagtaggccgtacaatgtagaatgtcaggttga ctccgttccgaccccgtcctccatatactggcagtggcagccatgtctacctccggattgtgtgaactctaacgactcct ggactaatgtcactgatctccgcgttacgctctctggagatctgtcaaatagtaaggtgtatttcagagcggcgagatcg ggaatgtttagatgtgtggctgataacactataggatctgattactatgatactgtagtcaaagtcttttatgcacctgc agtaacaatacaatcgtctaaggttatgatggacaaatattacatgattagtaggccgtacaatgtagaatgtcaggttg actccgttccgaccccgtcctccatatactggcagtggcagccatgtctacctccggattgtgtgaactctaacgactcc tggactaatgtcactgatttccgcgttacgctctctggagatctgtcaaatagtaaggtgtatttcagagcggcgagatc gggaatgtttagatgtgtggctgataacactataggatctgattactatgatactgtagtcaaagtcttttacagtccta gtggtatggatatggacatgtcatcagattcccttattgaagaaaatccactcaatgtatcctgtcgtgtcacaaaatgg gaatattctgacgtgagtgtctactttgtacggagaggaaaggtgaaggcagtccgtctgacagagaacaactggacgta catagatactttatctaccaataaatcacacgtcacaaagctttatatacccagtgtcaatatgactaatgacggctcat atagatgtgtaccaacgcttttaaacggcactgtagaccacgaggggtataaaagtaaagacttcagggtcatagccatt gaaaagccaaagtttgtctccaagaatcacgaggtggttgaggaggtgcgagccataaaaggtgacatgttcattctacg tgagtgtgaggttacaggaataccaaagccctctgtacgctggtataaagatggcatgattatcgatactgaaaacaata ctcttggcatcacattgtctgatgacgatatgagtgtgggaggagacaaggacacacaatataagtcattacatgattta tttgcagtcaacatcaatacaaaggcaggactttcccgaaccaagacggccaccagtaccatcattatagtcgttgtcgt ggcaacagttctaataatcgttatcttgtttgcggcagtatgtctatacagaaagagaacagccgctctgcataaggaac tggagcagtcattaatacagcctagtgctgattacaaccctgagctgccgatagacgaacagacaagctgtataccgtat gatcctaaatgggaattcccaaagaaacgtctcagacaaggaatggttcttggtcaaggagcatttggtagagttataaa ggctgaggctataggtatagtggaacatgaagacatcacagtggtagctgtcaaaatggtcaaagattgtacagatagag accaaatgatggctttattatctgaactaaaaatccttatccacataggacagcatcttaacattgtcaacctacttgga gctgttactaaagatatcagatatggagaattatacgttattgtggagtactgtcactttgggaatctacgttccttcat actgaaacacaaggaggaatttaaagatgtaatgaacgattacgtagacccggctacggagaaacagagagaagcagcac gagaggctgcagccagtaaaccttactatgttaataaagccctgatagaaaatacggcagatctgattggaccacctcta acaaccaaaaatctcatctgctgggcattccaagtggccagggggatggagtacctggcctctaaaaagtatattcacag agatttggcagctaggaatgtattattagcagaggataatgtagtgaagatatgtgactttggtctggctaaggactgct ataaaaacccagaatatcacaaaaaaggagacggtcccgtaccagtgaaatggatggccattgaatccctcactcatagg ctgtatacctcaaaaagtgatgtatggtcatatggtatatttctatgggagttattttctttaggaggaagcccttatcc tggtgtagagatcaatgagaagtttataggtttactgaaggacgggtacagaatggagaaaccaaggcattcttctgatg aaatgtataaggtgatgcaggcgacatggagagaggacgcggatgatcgaccaaccttcacacagctggcgtgcttaatg ggagatttcctggaagaaaacgtcaaacagtattatttagacctaacagagccctacctcaaaatgaccgatctagaagc tggtgcaaaaggaacagaggaatctggcgctagtggttatgacggttatttcaaaatgaaccaacgaaaatcagactacc taaaaatgtccccagctcctcccccacctatagatgtaaaatctctggaggaggataaggagggatatatcaatgaaaag aaatataaaaagctgaaagaaaaaggagatgaaacggaactacagccgctgacaaaatctacggatgagtgtacgataga ggacgaagaagaggaagtgtttctcagggcaaaagacaaggagggaagaaggagtgaacgagaggagtcacctctacatc tgaacactcgtgcggacatacatcggagtgaagacactgacagtggtcactcaagtacatatgcaccgggaacacctcct gatgtcggcaatgatgggtatcttatacccaagacaggacccgattcacagatggtgtttgtcgagccagaaactccgtc aaaatctgtaagcactagtgacacgcgttcgaatgagttcggccatgactatcatttctcaccaccacctacgtattcag cagtattacaggatggcgataccaatgtgtag |
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Protein
| Protein ID | pfu_aug2.0_456.1_20798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_456.1_20798.t1 MYYLVPTHKGTLRYILLAVLYFTCVVSQDGAFSGLNPKPDIFVYPDLSGNETEESSPINVHENELVVDSGDTFTIECFGG YPMTLVIKRGKDIGNKANNYDRLKVEERPVSNNTNTNRPYGSIFVISNTDYTYTGEYTCQYIQNKLSSSIYVYVRDEKKL LAPFGGTFPPNIPIYPMLVYHYRETAIRCRPTDPSVNMTLIKINGPQYIILKTGDEHAILYDPHRGFILQYPNAFFSGLF RCIAERDTTTDRLTFQLTYLRATSPPMPYFTPASDMVVEIGSTFEIYCNVKVDKGVKIHFNWSYSSNENSDRVRYTRPIR DPVQTQFAYDHIYSKLTVMNAGKKDEGVYRCITTTHDGKSKPIEKLVYIQDEPVLIIGEYSISSPSYSTNGLFYTVEGQG NVTIINTVEAFPSFNVTWYLNGAPIRIGGKEYNETKIESEYGIRIAKAAHHHRGNYTAVLSNGFEWKSKSFYLVVKYAPA VTIQSSKVMMDKYYMISRPYNVECQVDSVPTPSSIYWQWQPCLPPDCVNSNDSWTNVTDLRVTLSGDLSNSKVYFRAARS GMFRCVADNTIGSDYYDTVVKVFYAPAVTIQSSKVMMDKYYMISRPYNVECQVDSVPTPSSIYWQWQPCLPPDCVNSNDS WTNVTDFRVTLSGDLSNSKVYFRAARSGMFRCVADNTIGSDYYDTVVKVFYSPSGMDMDMSSDSLIEENPLNVSCRVTKW EYSDVSVYFVRRGKVKAVRLTENNWTYIDTLSTNKSHVTKLYIPSVNMTNDGSYRCVPTLLNGTVDHEGYKSKDFRVIAI EKPKFVSKNHEVVEEVRAIKGDMFILRECEVTGIPKPSVRWYKDGMIIDTENNTLGITLSDDDMSVGGDKDTQYKSLHDL FAVNINTKAGLSRTKTATSTIIIVVVVATVLIIVILFAAVCLYRKRTAALHKELEQSLIQPSADYNPELPIDEQTSCIPY DPKWEFPKKRLRQGMVLGQGAFGRVIKAEAIGIVEHEDITVVAVKMVKDCTDRDQMMALLSELKILIHIGQHLNIVNLLG AVTKDIRYGELYVIVEYCHFGNLRSFILKHKEEFKDVMNDYVDPATEKQREAAREAAASKPYYVNKALIENTADLIGPPL TTKNLICWAFQVARGMEYLASKKYIHRDLAARNVLLAEDNVVKICDFGLAKDCYKNPEYHKKGDGPVPVKWMAIESLTHR LYTSKSDVWSYGIFLWELFSLGGSPYPGVEINEKFIGLLKDGYRMEKPRHSSDEMYKVMQATWREDADDRPTFTQLACLM GDFLEENVKQYYLDLTEPYLKMTDLEAGAKGTEESGASGYDGYFKMNQRKSDYLKMSPAPPPPIDVKSLEEDKEGYINEK KYKKLKEKGDETELQPLTKSTDECTIEDEEEEVFLRAKDKEGRRSEREESPLHLNTRADIHRSEDTDSGHSSTYAPGTPP DVGNDGYLIPKTGPDSQMVFVEPETPSKSVSTSDTRSNEFGHDYHFSPPPTYSAVLQDGDTNV |
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