Gene
| Gene Model ID | pfu_aug2.0_456.1_20800 |
|---|---|
| Locus | scaffold456.1 : 269939 ... 272831 : + |
| To GenomeBrowser | scaffold456.1:269939..272831 |
| Genes list of scaffold | scaffold456.1 |
| Synonym | pfu_aug1.0_7336.1_31372 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_456.1_20800.t1 | 1 | 1 | Branch | 13 | 176 | 1.9e-31 | 109.1 | 1.9e-35 | 2.8e-31 | 108.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_456.1_20800.t1 | gi|524906545|ref|XP_005108563.1| | PREDICTED: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_456.1_20800.t1 | gi|676489075|ref|XP_009064819.1| | hypothetical protein LOTGIDRAFT_179636 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_456.1_20800.t1 | gi|676453432|ref|XP_009053354.1| | hypothetical protein LOTGIDRAFT_64655, partial [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_456.1_20800.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_456.1_20800.t1 atgagttctttaacagacgaagaacgtaattttccgttggcctacagcatcttattgtacaaggatgtcagccaatttga aatccttttacgtgcaatttatagaccacagaatttctactgtgttcacgtcgattcgaaatctgagaaaaatatttatg acgctgtatccggtattgctggatgttttgataacgtcataatgacgtcagaacgcttcaatgtctcctggggaaaatat tctattcttgagcccgagtttagctgcatgaagcaacttttgaagtacaaaaaatggaaatatttcatcaatctgactgg tcaagaatatcctctgagaacaaatgcagagttagtaaaaatcctgggagcttttaatcttgccaatgacgtagagggaa ctgttaaaagggcagatccaagtcgatgggtaaatgccggagttgtaccggatggaatagttccggtcaagggagctgta catatcactgtcaacagaggatttgtggagtatgtgatcaaaagtccagtagccgaaaggttcaaaaaggaatccagaat cagatga |
|
Protein
| Protein ID | pfu_aug2.0_456.1_20800.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_456.1_20800.t1 MSSLTDEERNFPLAYSILLYKDVSQFEILLRAIYRPQNFYCVHVDSKSEKNIYDAVSGIAGCFDNVIMTSERFNVSWGKY SILEPEFSCMKQLLKYKKWKYFINLTGQEYPLRTNAELVKILGAFNLANDVEGTVKRADPSRWVNAGVVPDGIVPVKGAV HITVNRGFVEYVIKSPVAERFKKESRIR |
|