Gene
| Gene Model ID | pfu_aug2.0_4566.1_22574 |
|---|---|
| Locus | scaffold4566.1 : 1 ... 4943 : + |
| To GenomeBrowser | scaffold4566.1:1..4943 |
| Genes list of scaffold | scaffold4566.1 |
| Synonym | pfu_aug1.0_79611.1_49224 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4566.1_22574.t1 | 2 | 1 | Lectin_C | 6 | 58 | 2.5e-28 | 98.7 | 3.3e-11 | 2.4e-07 | 31.3 |
| pfu_aug2.0_4566.1_22574.t1 | 2 | 2 | Lectin_C | 92 | 204 | 2.5e-28 | 98.7 | 5.0e-24 | 3.7e-20 | 72.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4566.1_22574.t1 | gi|524870397|ref|XP_005091983.1| | PREDICTED: macrophage mannose receptor 1-like [Aplysia californica] | 3.0e-38 |
| pfu_aug2.0_4566.1_22574.t1 | gi|704574415|ref|XP_010186484.1| | PREDICTED: macrophage mannose receptor 1-like, partial [Mesitornis unicolor] | 2.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_4566.1_22574.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4566.1_22574.t1 aatttaaattacattttaagggttcaacgtttgaatgggacaatggctggacataccaatatacaaagtgggatgataac gaaccatcggacatacaatcagagagctgtgttattatagattcagggaagtggaacgatataacatgtaacgtcaaact cccttcagtctgtcagtatagtttagtggatccccctaccacgcccccaccaggaatatgccctaatagtacatctggtt atcaaggttactgttattttgtggaaatcactcggagtaaatcctgggttggtgctgacgcagcctgtaaggaaatggga atggagcttgctagcgtacacagtcaagctgaagtgcagtttatacagagttacgcacgtcaaatcagcggacttcaggt ttctcctaaactttggattggacttcgtaaagatttagatgcatctgcttttgagtggactgacggcactcccttggact ttctgttttgggaggatggagaaccttctgacgtgtgggaagaggaggacgaagattgtgtagaaatgtacgctcatggt aaatggaacgacgtcaattgtaacgattataacaagaactacgtttgtaaaacgccacaagttccatatgcaaaaaccac aatggtacccggggaagataataccaatgttactcagctgatccctaaagacactggaaccaaaacgactaaagccaacc ctggaaacccaaaacaaccatacttattgccacatactggaactaaatcaagtcctgataaacgaaattctggatcatta acggcagggcagggtattggaatatttattggaatagcgttaatttgtgcccttgttggagcaggaatttacgttttccg tcgtattcagagaagtgctacgtacagtacagacagacaagggttctcaaatgctatgtatcataaatcagtagacaatg tctcttattctgacgacaatggcagtatatcctcacacagtaaaattgttaaaggtgggactcattaa |
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Protein
| Protein ID | pfu_aug2.0_4566.1_22574.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4566.1_22574.t1 FKLHFKGSTFEWDNGWTYQYTKWDDNEPSDIQSESCVIIDSGKWNDITCNVKLPSVCQYSLVDPPTTPPPGICPNSTSGY QGYCYFVEITRSKSWVGADAACKEMGMELASVHSQAEVQFIQSYARQISGLQVSPKLWIGLRKDLDASAFEWTDGTPLDF LFWEDGEPSDVWEEEDEDCVEMYAHGKWNDVNCNDYNKNYVCKTPQVPYAKTTMVPGEDNTNVTQLIPKDTGTKTTKANP GNPKQPYLLPHTGTKSSPDKRNSGSLTAGQGIGIFIGIALICALVGAGIYVFRRIQRSATYSTDRQGFSNAMYHKSVDNV SYSDDNGSISSHSKIVKGGTH |
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