Gene
| Gene Model ID | pfu_aug2.0_4566.1_22576 |
|---|---|
| Locus | scaffold4566.1 : 17476 ... 19936 : + |
| To GenomeBrowser | scaffold4566.1:17476..19936 |
| Genes list of scaffold | scaffold4566.1 |
| Synonym | pfu_aug1.0_2065.1_00948 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4566.1_22576.t1 | 1 | 1 | C1q | 170 | 293 | 2.6e-26 | 92.1 | 9.8e-29 | 5.8e-26 | 90.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4566.1_22576.t1 | gi|734609163|ref|XP_010731873.1| | PREDICTED: complement C1q and tumor necrosis factor-related protein 9-like [Larimichthys crocea] | 3.0e-13 |
| pfu_aug2.0_4566.1_22576.t1 | gi|410909728|ref|XP_003968342.1| | 3.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_4566.1_22576.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4566.1_22576.t1 atgaaattttctatctacattttcagtctttccttcacattgtgttcacttcttactgacactttaggattttcaaaaga ataccagttgcctggcgatcattctcatggaagtgttctttccgattccactcagcagacgacaaacttgaattcaattc aacaacaactcgatggccttacccagtcgttgaattcctacgtacaaggataccaagaactgagagtcaaatatgacggt gtgaggaaagaactgaataatctgacgtcatcccttcagcagaagatcattgattatgataaagtggtgaacagatactt agtgttggagcaggaatacaattttactaaatctcgcgtgtccaaccttacaaacaggattctgacattggaacaagata ggaactcgtcttctaatggggatcgcctgtcatctacagctcttgaaaaaatctcaaaaagaatcaccgaagttgaacag atacaagccttacaacaatcgcctattgctttcctagccagattgtcaactaatttctcacctaaggaggacaaaaagat cgtgtttgacgtgcatgatataaacgaaggtagcgcctatagttctacaacgggtgtcttcacagctcctatagaaggtc tgtacctgttcacagtaacactcacaaccaggtccaaggacccggatgcttacctcttccgcaatggctacacagtgtta ccactttttaaccactctgaagacgactacagacaagcaagtgcctccgttgttatacatttgttaagaggggatagagt ctgggtagactggaacggaggtactgagacttctgttatacaggccaaacatgagactgttttcagtggctgcttactcc aatcataccctacatcgacaactggttaa |
|
Protein
| Protein ID | pfu_aug2.0_4566.1_22576.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4566.1_22576.t1 MKFSIYIFSLSFTLCSLLTDTLGFSKEYQLPGDHSHGSVLSDSTQQTTNLNSIQQQLDGLTQSLNSYVQGYQELRVKYDG VRKELNNLTSSLQQKIIDYDKVVNRYLVLEQEYNFTKSRVSNLTNRILTLEQDRNSSSNGDRLSSTALEKISKRITEVEQ IQALQQSPIAFLARLSTNFSPKEDKKIVFDVHDINEGSAYSSTTGVFTAPIEGLYLFTVTLTTRSKDPDAYLFRNGYTVL PLFNHSEDDYRQASASVVIHLLRGDRVWVDWNGGTETSVIQAKHETVFSGCLLQSYPTSTTG |
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