Gene
| Gene Model ID | pfu_aug2.0_458.1_27424 |
|---|---|
| Locus | scaffold458.1 : 121483 ... 122605 : - |
| To GenomeBrowser | scaffold458.1:121483..122605 |
| Genes list of scaffold | scaffold458.1 |
| Synonym | pfu_aug1.0_785.1_65621 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_458.1_27424.t1 | 1 | 1 | Spot_14 | 17 | 161 | 3.0e-25 | 88.9 | 3.6e-29 | 5.3e-25 | 88.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_458.1_27424.t1 | gi|524885157|ref|XP_005099189.1| | PREDICTED: mid1-interacting protein 1A-like [Aplysia californica] | 2.0e-40 |
| pfu_aug2.0_458.1_27424.t1 | gi|676444608|ref|XP_009050483.1| | hypothetical protein LOTGIDRAFT_113945 [Lottia gigantea] | 3.0e-38 |
| pfu_aug2.0_458.1_27424.t1 | gi|241096187|ref|XP_002409548.1| | Mid1-interacting protein, putative [Ixodes scapularis] | 1.0e-19 |
| pfu_aug2.0_458.1_27424.t1 | gi|339236347|ref|XP_003379728.1| | putative gastrulation-specific protein G12 [Trichinella spiralis] | 3.0e-19 |
| pfu_aug2.0_458.1_27424.t1 | gi|556975329|ref|XP_005995320.1| | PREDICTED: mid1-interacting protein 1 [Latimeria chalumnae] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_458.1_27424.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_458.1_27424.t1 atgatgtcttccagttcgccagatttaagacattcttcaagcaatggttcttcacaggaatcgcttcttactgctttgaa caaatttgtgcaagctgttgattctatggacgacagggtaatggtaccgagccggttaaaagacatgagtgtgacagact cggacacagacagaccgatggtcagtgagaaaaacaataatatggcactagtgccgtcaattacaccgggtacggactta tttggattctatagtctactcaatactattaaaacagaactgatcaccggcacaaaatcggaagaagatcatacccagga gactgaggctcctgaaggggtaattgatgataatgatgcatcaaagaaaaccgcccaagtgtttaaacaccacctaagtg gactttttagtgttcttcatcaaatgacggaaacagctaaatatctgacagtaaaatatgaatccgagattggtgaaaac tcaagtaaatcgctgtcttccttgacaatttag |
|
Protein
| Protein ID | pfu_aug2.0_458.1_27424.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_458.1_27424.t1 MMSSSSPDLRHSSSNGSSQESLLTALNKFVQAVDSMDDRVMVPSRLKDMSVTDSDTDRPMVSEKNNNMALVPSITPGTDL FGFYSLLNTIKTELITGTKSEEDHTQETEAPEGVIDDNDASKKTAQVFKHHLSGLFSVLHQMTETAKYLTVKYESEIGEN SSKSLSSLTI |
|