Gene
| Gene Model ID | pfu_aug2.0_46.1_20107 |
|---|---|
| Locus | scaffold46.1 : 185283 ... 208081 : - |
| To GenomeBrowser | scaffold46.1:185283..208081 |
| Genes list of scaffold | scaffold46.1 |
| Synonym | pfu_aug1.0_12494.1_10478 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| wingless-type mmtv integration site member 5b | GO:0001501 GO:0005109 GO:0005578 GO:0005615 GO:0007223 GO:0007423 GO:0030111 GO:0030182 GO:0032879 GO:0042074 GO:0044464 GO:0045165 GO:0048522 GO:0048523 GO:0060027 GO:0060560 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_46.1_20107.t1 | 1 | 1 | wnt | 56 | 370 | 0.0 | 394.5 | 0.0 | 0.0 | 394.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_46.1_20107.t1 | gi|524886309|ref|XP_005099751.1| | PREDICTED: protein Wnt-5b-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_46.1_20107.t1 | gi|676486792|ref|XP_009064088.1| | hypothetical protein LOTGIDRAFT_130786, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_46.1_20107.t1 | gi|556956474|ref|XP_005989502.1| | PREDICTED: protein Wnt-5b [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_46.1_20107.t1 | gi|55742531|ref|NP_001006767.1| | protein Wnt-5b precursor [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_46.1_20107.t1 | gi|736187739|ref|XP_010770541.1| | PREDICTED: protein Wnt-5a [Notothenia coriiceps] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_46.1_20107.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20107.t1 atggggcaagaatgtggcttcctgaacggaattattttctctttgataggatttatgcatatattagcggcgacaggatt aggggctaattggtggaatttgggaatctcagcgcggtatcattcgtggagaaaccctacattatatatggtggggtcta cgcccttgtgtactcaattaaaaggactgtccccggggcagataggactgtgtcagcgttatacagatcatatgcccagt gtcgggagaggggcacaaattggaatacacgagtgtcaatttcaattccaatcgaggcgatggaactgttctataataga aggcgattcgtctgtttttggtccagtattagaacgggccagcagagaagcagcattcacccatgccatatcggcggccg gtgtgttacattctgtgagtcgctcatgtaaggatggggaattgaacagttgtgggtgtagtcgggcccgtaggcccaag gaccttgcaagggattggatttggggaggatgtggggacaatattgaatacgggtataaatttgctgaagtgtttgtgaa tatacgagaaaaggacaagaaccaccccagacattctaaagaattagcaaggatgctgatgaatttgcataataatcacg ccggtttaagggctgtgtataattacgctatggtttcctgtaaatgtcacggggtttccggttcctgtagtttacggaca tgctggcagagtttaccgaatttccgcgaggttggactccggctaaaagacaaatacgacggagcggtagaagttaaatt taacaaaagaggaacaaaattaaaaagaaagaacagaaaatttaataaaccaggaaaagaagatttgatgtatcttgaat catcaccggattattgcaatgcaaatccggaaaccggatctttgggcacggttgcccgtgagtgtaatcgcagttccgcc ggaacagacggttgtaatcttttatgttgtggtaggggttataacacttttaaacgaaaagttgttgaacgttgtcattg caaattcaagtggtgttgctacgttgagtgtaaaacttgtgaaaaaattgttgacgtacatacttgcaagtaa |
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Protein
| Protein ID | pfu_aug2.0_46.1_20107.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20107.t1 MGQECGFLNGIIFSLIGFMHILAATGLGANWWNLGISARYHSWRNPTLYMVGSTPLCTQLKGLSPGQIGLCQRYTDHMPS VGRGAQIGIHECQFQFQSRRWNCSIIEGDSSVFGPVLERASREAAFTHAISAAGVLHSVSRSCKDGELNSCGCSRARRPK DLARDWIWGGCGDNIEYGYKFAEVFVNIREKDKNHPRHSKELARMLMNLHNNHAGLRAVYNYAMVSCKCHGVSGSCSLRT CWQSLPNFREVGLRLKDKYDGAVEVKFNKRGTKLKRKNRKFNKPGKEDLMYLESSPDYCNANPETGSLGTVARECNRSSA GTDGCNLLCCGRGYNTFKRKVVERCHCKFKWCCYVECKTCEKIVDVHTCK |
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