Gene
| Gene Model ID | pfu_aug2.0_46.1_20108 |
|---|---|
| Locus | scaffold46.1 : 259843 ... 263786 : + |
| To GenomeBrowser | scaffold46.1:259843..263786 |
| Genes list of scaffold | scaffold46.1 |
| Synonym | pfu_aug1.0_53195.1_05529 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_46.1_20108.t1 | 3 | 1 | F-box | 11 | 52 | 1.2e-09 | 37.6 | 3.8e-11 | 6.2e-08 | 32.0 |
| pfu_aug2.0_46.1_20108.t1 | 2 | 1 | F-box-like | 17 | 53 | 2.0e-09 | 37.0 | 4.0e-12 | 6.6e-09 | 35.3 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 1 | LRR_1 | 80 | 87 | 3.5e-12 | 44.5 | 9.0 | 15000.0 | -3.4 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 1 | LRR_8 | 80 | 107 | 1.8e-11 | 43.6 | 0.033 | 55.0 | 3.6 |
| pfu_aug2.0_46.1_20108.t1 | 3 | 2 | F-box | 87 | 96 | 1.2e-09 | 37.6 | 5.6 | 9100.0 | -3.5 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 2 | LRR_8 | 95 | 132 | 1.8e-11 | 43.6 | 0.0052 | 8.5 | 6.2 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 1 | LRR_4 | 97 | 140 | 6.6e-15 | 54.3 | 9.3e-05 | 0.15 | 11.6 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 1 | LRR_6 | 98 | 115 | 3.8e-24 | 82.0 | 0.0036 | 5.9 | 7.2 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 2 | LRR_1 | 98 | 118 | 3.5e-12 | 44.5 | 0.00046 | 0.76 | 10.0 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 3 | LRR_8 | 98 | 159 | 1.8e-11 | 43.6 | 0.00062 | 1.0 | 9.1 |
| pfu_aug2.0_46.1_20108.t1 | 3 | 3 | F-box | 121 | 134 | 1.2e-09 | 37.6 | 0.11 | 180.0 | 1.9 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 2 | LRR_6 | 123 | 147 | 3.8e-24 | 82.0 | 0.00022 | 0.37 | 11.0 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 2 | LRR_4 | 125 | 163 | 6.6e-15 | 54.3 | 7.1e-05 | 0.12 | 12.0 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 3 | LRR_1 | 126 | 139 | 3.5e-12 | 44.5 | 0.21 | 350.0 | 1.9 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 4 | LRR_8 | 137 | 164 | 1.8e-11 | 43.6 | 0.00062 | 1.0 | 9.1 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 3 | LRR_6 | 149 | 164 | 3.8e-24 | 82.0 | 0.027 | 45.0 | 4.5 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 4 | LRR_1 | 151 | 164 | 3.5e-12 | 44.5 | 0.013 | 22.0 | 5.6 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 5 | LRR_8 | 228 | 241 | 1.8e-11 | 43.6 | 0.015 | 25.0 | 4.7 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 4 | LRR_6 | 230 | 253 | 3.8e-24 | 82.0 | 0.0017 | 2.8 | 8.2 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 3 | LRR_4 | 232 | 279 | 6.6e-15 | 54.3 | 0.00045 | 0.75 | 9.4 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 5 | LRR_1 | 232 | 253 | 3.5e-12 | 44.5 | 0.005 | 8.2 | 6.8 |
| pfu_aug2.0_46.1_20108.t1 | 2 | 2 | F-box-like | 238 | 245 | 2.0e-09 | 37.0 | 3.4 | 5600.0 | -2.9 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 5 | LRR_6 | 266 | 284 | 3.8e-24 | 82.0 | 0.023 | 37.0 | 4.8 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 6 | LRR_1 | 266 | 279 | 3.5e-12 | 44.5 | 1.2 | 2000.0 | -0.4 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 6 | LRR_8 | 266 | 325 | 1.8e-11 | 43.6 | 3.1e-06 | 0.0051 | 16.5 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 6 | LRR_6 | 289 | 313 | 3.8e-24 | 82.0 | 0.00018 | 0.29 | 11.3 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 4 | LRR_4 | 290 | 330 | 6.6e-15 | 54.3 | 1.7e-07 | 0.00029 | 20.3 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 7 | LRR_1 | 291 | 305 | 3.5e-12 | 44.5 | 0.042 | 69.0 | 4.0 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 7 | LRR_6 | 314 | 338 | 3.8e-24 | 82.0 | 3.0e-05 | 0.05 | 13.6 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 8 | LRR_1 | 316 | 330 | 3.5e-12 | 44.5 | 0.0011 | 1.9 | 8.8 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 8 | LRR_6 | 342 | 364 | 3.8e-24 | 82.0 | 1.5e-05 | 0.025 | 14.5 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 9 | LRR_1 | 342 | 354 | 3.5e-12 | 44.5 | 0.2 | 340.0 | 1.9 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 7 | LRR_8 | 365 | 375 | 1.8e-11 | 43.6 | 0.6 | 990.0 | -0.5 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 5 | LRR_4 | 368 | 381 | 6.6e-15 | 54.3 | 0.46 | 760.0 | -0.2 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 9 | LRR_6 | 369 | 385 | 3.8e-24 | 82.0 | 0.0033 | 5.4 | 7.3 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 6 | LRR_4 | 369 | 407 | 6.6e-15 | 54.3 | 0.1 | 170.0 | 1.9 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 10 | LRR_1 | 369 | 381 | 3.5e-12 | 44.5 | 0.57 | 930.0 | 0.6 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 7 | LRR_4 | 393 | 432 | 6.6e-15 | 54.3 | 0.00072 | 1.2 | 8.8 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 8 | LRR_8 | 393 | 450 | 1.8e-11 | 43.6 | 3.4e-07 | 0.00056 | 19.6 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 10 | LRR_6 | 394 | 411 | 3.8e-24 | 82.0 | 0.0017 | 2.7 | 8.3 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 11 | LRR_1 | 394 | 420 | 3.5e-12 | 44.5 | 0.022 | 36.0 | 4.9 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 11 | LRR_6 | 417 | 437 | 3.8e-24 | 82.0 | 0.0017 | 2.9 | 8.2 |
| pfu_aug2.0_46.1_20108.t1 | 8 | 8 | LRR_4 | 418 | 450 | 6.6e-15 | 54.3 | 6.8e-05 | 0.11 | 12.1 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 12 | LRR_1 | 419 | 436 | 3.5e-12 | 44.5 | 0.0014 | 2.4 | 8.5 |
| pfu_aug2.0_46.1_20108.t1 | 12 | 12 | LRR_6 | 442 | 451 | 3.8e-24 | 82.0 | 2.7 | 4500.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_46.1_20108.t1 | gi|752883472|ref|XP_011259436.1| | PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein 14 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_46.1_20108.t1 | gi|242004502|ref|XP_002423122.1| | fbxl14, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_46.1_20108.t1 | gi|751221086|ref|XP_011163711.1| | PREDICTED: F-box/LRR-repeat protein 14 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_46.1_20108.t1 | gi|241575665|ref|XP_002403227.1| | F-box/LRR-repeat protein, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_46.1_20108.t1 | gi|676486795|ref|XP_009064089.1| | hypothetical protein LOTGIDRAFT_221404 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_46.1_20108.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20108.t1 atggagagaaagggcgaaaagcccaactcaaatatttcttgtttgtttcccgaggttctggtgatgatattttgtcacct agatgtcaaagacaagggaagagcggctcaagtttgtaagaagtggcgggatgccgcctacagtcgtatggtatggaggg gcgacaccgccaaacttcatcttcggcggtccaatccatctttgtttccaagtcttgtaaaacgtggtatacggcgtatt caagtactgagtttgagacgcagtctgagggacgttgtcgatggagtagagaatttagtgacgctgaatttaagtggttg ttttaatgtaactgacactgcattaggacatgcattctcaaagagtttacccaccatcactgttctcaatctcagtttgt gtaaacaaatttcagacaacagcctgagtcgtatagctcagagtctgactaatctagaggtgctggaactaggaggatgt tgtaacattacgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnntaatggattacttctcgtcgcatggggtctacgaaagctgaaaacattgaaccttagaagt tgtagtcacgtttcagatgttggaattggacatttggcaggtttaagtccagatgctgcgtctggaactttggaacttga aaatctcggacttcaggattgtcagaaacttacggatcaagctttgaaaaatgttagtatcggattaacaaatttgaaga caatgaatctcagtttttgtgccagtgttacagattccggtttgaaatttcttgcgaaaatgccaagtctccgtgagctt aatctcagaagctgtgataacataagtgacactggtattggataccttgctgaaagtgggtcaagattaacaaagttgga tgtaagtttttgtgacaaagtgggagatcaaggacttgtctttcttgcgcaaggattatttggactacagagtataagct tatgtgcttgcaatataagtgatgagggaatttgtcgcttggtgtgtgctcttcatgaactaacaacactgaacattggt cagtgtgtccgcatcactgacaaaggacttggaataatagctgaccatttaaaaaacctgcagtcaatagatttgtatgg atgtactcgtattacaactgttggccttgaaagaataatgcaactcagaaatttgtctgccctaaatttaggactttggc ataaaagatga |
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Protein
| Protein ID | pfu_aug2.0_46.1_20108.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20108.t1 MERKGEKPNSNISCLFPEVLVMIFCHLDVKDKGRAAQVCKKWRDAAYSRMVWRGDTAKLHLRRSNPSLFPSLVKRGIRRI QVLSLRRSLRDVVDGVENLVTLNLSGCFNVTDTALGHAFSKSLPTITVLNLSLCKQISDNSLSRIAQSLTNLEVLELGGC CNITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLLLVAWGLRKLKTLNLRS CSHVSDVGIGHLAGLSPDAASGTLELENLGLQDCQKLTDQALKNVSIGLTNLKTMNLSFCASVTDSGLKFLAKMPSLREL NLRSCDNISDTGIGYLAESGSRLTKLDVSFCDKVGDQGLVFLAQGLFGLQSISLCACNISDEGICRLVCALHELTTLNIG QCVRITDKGLGIIADHLKNLQSIDLYGCTRITTVGLERIMQLRNLSALNLGLWHKR |
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