Gene
| Gene Model ID | pfu_aug2.0_46.1_20109 |
|---|---|
| Locus | scaffold46.1 : 273063 ... 289588 : + |
| To GenomeBrowser | scaffold46.1:273063..289588 |
| Genes list of scaffold | scaffold46.1 |
| Synonym | pfu_aug1.0_6559.1_31237 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_46.1_20109.t1 | 4 | 1 | Hist_deacetyl | 14 | 148 | 0.0 | 498.1 | 1.4013e-44 | 2.1e-40 | 138.9 |
| pfu_aug2.0_46.1_20109.t1 | 4 | 2 | Hist_deacetyl | 145 | 216 | 0.0 | 498.1 | 3.4e-16 | 5.1e-12 | 45.7 |
| pfu_aug2.0_46.1_20109.t1 | 4 | 3 | Hist_deacetyl | 326 | 576 | 0.0 | 498.1 | 0.0 | 0.0 | 245.5 |
| pfu_aug2.0_46.1_20109.t1 | 4 | 4 | Hist_deacetyl | 577 | 657 | 0.0 | 498.1 | 9.1e-24 | 1.4e-19 | 70.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_46.1_20109.t1 | gi|746858580|ref|XP_011060055.1| | PREDICTED: histone deacetylase 6 isoform X4 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_46.1_20109.t1 | gi|746858574|ref|XP_011060052.1| | PREDICTED: histone deacetylase 6 isoform X1 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_46.1_20109.t1 | gi|751230818|ref|XP_011168935.1| | PREDICTED: histone deacetylase 6 isoform X1 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_46.1_20109.t1 | gi|242022432|ref|XP_002431644.1| | histone deacetylase hda2, putative [Pediculus humanus corporis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_46.1_20109.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20109.t1 atgcttagtctacatacaaaagagcatgtggaaatacttaaacaaactgccagcatgtgtaaagaagatatggagaaact gtcgcaaaaatatgattacctttattttcataatatacagaatggtatggcaatcatcagacccccaggtcaccatgcca tggagaatgaattcaatggttactgctacctcaataatgtggccatagctgcaaaactagccatagaaaagtacaaagtt caaagggtgttaattttagactgggatgttcatcatggtcaaggcatccagtacagcttttacaatgatccaagagttct gtatatttctatccataagtacctgtacggagaggaatggccgtacctgagggaatcagactttgactatataggtgaag gacagggacgtggatttaacattaatattccattaaacgaatataacccagatctggtgctagtctcagcaggttatgat gctgctttaggatgtcctgagggagagatggaggtaactcctgcttgctttgcccattttgtaaacttgttatctccctt ggctggtggtaaattgtgccttgttcttgagggaggatactgtattaagactctggcagagggtgtggccctgtccctag gagctttactaggagatccctgccctagaattggtcacatcggtgctcctcacaaaagtgtatgggagactatacttaat gtgataaaggttctccgtccatattggaacagcctcggatatcaaggaaacatgacatcattatctgatccacagtatcc agaactgctttactggccacctaaggcaggtgtcaaattctacacccatgacaagccagacacgttttcccttgaccagg attgttttaatcctgagtaccatgaagtagtggcagaactgaaggagagggtggataagatgatacaggataccacattc cacaaagccaaacacaatggatatgaggagtgtccagagagaatacagcatatctatgatgccttacatagtaacggtct ttggcagagatgtttggaagtcaagggcagacaggcaactgatgatgagctgtctttagtacatggttatctgcagcagt ttaggagagcgatgtcccttggggaggaggctctattacagtatcagtccagctttaagtcagtctacctctgtaaggat agttatacagcagctagctgggcagttggatgtactttgtctgttgtagattctgtaatgagaggagagagtcagagtgg agtagctatagtcagaccaccaggacatcatgctgaggccaacttaatgatgggattttgtgtatttaacaatgttggta ttgctgtaaagtacgcacagaaaacttatggcgtcaaaagaattctgatcgtggattgggatattcaccatgggaatgcg ctacagtcacagttctatgatgatataagtgtgttatatgtatccttacaccggtttgaccaaggttcgttttatccgta tggtggggaaggctaccacaaacgtgttggaggcaaaaaggctcagggattcaatgttaatattgcctggaatgatggtt cgaaaggagacggtgattacatctcggcttttcatcatttggtactcccactggcttatgagtttgatccagagttagtg tttgtagctgcagggttcgatgctgtacaaggagatgaactgggttcgaagggagacggtgattacatctcggcttttca tcatttggtactcccactggcttatgagtttgatccagagttagtgtttgtagctgcagggttcgatgctgtacaaggag atgaactgcatggaggttatagcttgacaccagctgtttatggtcacatgacccggtcactaatgggattttctgaaggg aaagttattttggtgctagagggtggctacaacctgaaatcaacgtcagagattgacctacccacagaacctcaaatcaa cgatatgaaagaaaaggcagtacaggaataa |
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Protein
| Protein ID | pfu_aug2.0_46.1_20109.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20109.t1 MLSLHTKEHVEILKQTASMCKEDMEKLSQKYDYLYFHNIQNGMAIIRPPGHHAMENEFNGYCYLNNVAIAAKLAIEKYKV QRVLILDWDVHHGQGIQYSFYNDPRVLYISIHKYLYGEEWPYLRESDFDYIGEGQGRGFNINIPLNEYNPDLVLVSAGYD AALGCPEGEMEVTPACFAHFVNLLSPLAGGKLCLVLEGGYCIKTLAEGVALSLGALLGDPCPRIGHIGAPHKSVWETILN VIKVLRPYWNSLGYQGNMTSLSDPQYPELLYWPPKAGVKFYTHDKPDTFSLDQDCFNPEYHEVVAELKERVDKMIQDTTF HKAKHNGYEECPERIQHIYDALHSNGLWQRCLEVKGRQATDDELSLVHGYLQQFRRAMSLGEEALLQYQSSFKSVYLCKD SYTAASWAVGCTLSVVDSVMRGESQSGVAIVRPPGHHAEANLMMGFCVFNNVGIAVKYAQKTYGVKRILIVDWDIHHGNA LQSQFYDDISVLYVSLHRFDQGSFYPYGGEGYHKRVGGKKAQGFNVNIAWNDGSKGDGDYISAFHHLVLPLAYEFDPELV FVAAGFDAVQGDELGSKGDGDYISAFHHLVLPLAYEFDPELVFVAAGFDAVQGDELHGGYSLTPAVYGHMTRSLMGFSEG KVILVLEGGYNLKSTSEIDLPTEPQINDMKEKAVQE |
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