Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_46.1_20114
Locus scaffold46.1 : 357534 ... 370362 : -
To GenomeBrowser scaffold46.1:357534..370362
Genes list of scaffold scaffold46.1
Synonym pfu_aug1.0_3114.1_37506

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_46.1_20114.t1 3 1 COesterase 6 538 0.0 1310.8 0.0 0.0 445.5
pfu_aug2.0_46.1_20114.t1 5 1 Abhydrolase_3 122 214 1.3e-36 126.1 3.5e-14 6.5e-11 42.1
pfu_aug2.0_46.1_20114.t1 3 1 Abhydrolase_5 122 219 1.9e-11 43.9 4.1e-05 0.077 12.7
pfu_aug2.0_46.1_20114.t1 3 1 Peptidase_S9 146 227 9.3e-10 38.0 5.7e-05 0.11 11.7
pfu_aug2.0_46.1_20114.t1 5 2 Abhydrolase_3 423 452 1.3e-36 126.1 2.0 3700.0 -2.8
pfu_aug2.0_46.1_20114.t1 3 2 COesterase 560 1065 0.0 1310.8 0.0 0.0 435.7
pfu_aug2.0_46.1_20114.t1 5 3 Abhydrolase_3 575 592 1.3e-36 126.1 2.2 4100.0 -2.9
pfu_aug2.0_46.1_20114.t1 3 2 Abhydrolase_5 667 781 1.9e-11 43.9 9.5e-06 0.018 14.8
pfu_aug2.0_46.1_20114.t1 5 4 Abhydrolase_3 668 763 1.3e-36 126.1 8.3e-13 1.5e-09 37.7
pfu_aug2.0_46.1_20114.t1 3 2 Peptidase_S9 693 764 9.3e-10 38.0 7.4e-05 0.14 11.3
pfu_aug2.0_46.1_20114.t1 3 3 COesterase 1081 1588 0.0 1310.8 0.0 0.0 426.7
pfu_aug2.0_46.1_20114.t1 5 5 Abhydrolase_3 1181 1270 1.3e-36 126.1 5.9e-14 1.1e-10 41.4
pfu_aug2.0_46.1_20114.t1 3 3 Abhydrolase_5 1181 1279 1.9e-11 43.9 5.2e-05 0.097 12.4
pfu_aug2.0_46.1_20114.t1 3 3 Peptidase_S9 1206 1277 9.3e-10 38.0 7.7e-05 0.14 11.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_46.1_20114.t1 gi|617377959|ref|XP_007545574.1| PREDICTED: carboxylesterase 1E-like [Poecilia formosa] 0.0

Transcript
Transcript IDpfu_aug2.0_46.1_20114.t1
Definition-
>pfu_aug2.0_46.1_20114.t1
atgctgttctttagcatccttttatcagtactttgtacaattacttgcgaggatgtagaaatcatcaccagcttcggaag
attaaaaggaagaaaagatattgtcagtaagggagggtcagttgtttaccaatttctgaagattccctatgccatgcctc
caattggagacttgcgattccagaaaccacgtccacatacccctctctctgggttatatgatgcgacacagttaggacca
tcatgcatgcaaccaatatcggaagaaaataagctcttcttatccaacttcaatgtttccgaggattgtttacatcttaa
catctatgtacctcatgatataagcaccgtaccaagagctgtaatggtatggatacacggaggtggctggatcgttggac
agggcaccatgtatgatggttcgattctggcttctgcaggggacgtcatcgttgttactatcaactacagactcggattc
tttggttttatgagtaccctagataatcagtatccaggaaattacggactatttgatgcgttagaagcgataaaatggac
aaagaaacacatttcaagctttggtggcgacccaaataagattacactttttggtgaatcagcaggtgctttcaatgttc
tatatttggcaacctcacctctcagtaaaggactatttcagcgcgttataatggaaagcggaggggatataagaggtgag
gcccttgatccagaaataaggaatactacttttcaagtcatgacagactttggttgcttaaatgaatcagatgtatatcc
aatgacgcctcaacacattcagtgtctgcgtaatatagatgcagatacaatttcaaaagctacaataaatttaggtacat
atagagatgaacatcttcctacatttaaagatgcgtttcgaccttgtattgacggtgaattaataactgatgttccagag
aagttactccagaacctgtcctcagattcttccatggtcttttattctttagacatcttggatggcatcaataacggaga
gggagggatgatgattccattcgtagaaaaattgcagaacacctcaaactttaatatcacgaatggtattccacgtggtg
tattttgtgataagcttatccccgaaattgttgctttatattatgattcaaacaaagacgtatcaaaagttatgtgtgga
gcttatacaaacttagacggggtagaagaacaaggcagagcagccactgattggtatggggatttcatattgatatatcc
gaatcagcatgtgctagacacacactcgagatcatcctctaaaagtacctaccaatatgtcttttcaaagtccccatctt
atcaatggtactccctccctccatggttcattggagcggatcatgctattgaattgccatgtgtcttcggtttgagaaac
tttgtgaaaaactacagtcagtctgatgagaaactctgtaatactgttatggcatactggaccaactttgctaaaacagg
aaatcctaattcagacggtttaccatattggccatcctacaccatcaggaatgcatacatggaccttaacgatcacgtga
cagctaaacatgatttatacagggacaggcttgttctttgggataagactataccatttattctatcaaagcagaaagat
gcagtacagcctatagaactcaccagtagcttcggaaggctaaaaggaagaaaagtcagtcttattgagggtgaaaatgt
tgtgcatcagtttcttaagattccttacgccaaacctccgactggaaatttgcgattccagaaaccacatcctcatgata
acctcaacaggctttacgatgcaactgaatttggaccatcttgtatgcaactgttgttggacaactttaagtattacatg
ccaaacttaaacatttctgaagactgtttgcatcttaatgtctatgtgccaaaggataacagtactttgctgaaacctgt
tatggtatttatacacggtggagggtggatcgcaggacaaggcactttgtatgatggttccattctggcttctacaggtg
acgtcatagttgttaccatcaactacagactcggattctttggttttatgagtactttaaatgatcaatatccaggaaat
tacggactatttgatgcgctggaagcgataaagtggacaaagaaacatattcaaagctttggaggcgaccccaatgagat
aacactttttggtgaatcagcaggtgctttcaacgttctatatttggcaacctctcctctgagtagaggactatttcagc
gggttattattgaaagcggaggggatctaagagctgatgccgttgaccctgaaataaagaacacaacattcaaagtcatg
aaggcaatgtcttgtatcagtaactcggattcatctgcattaacatcagaaaatattcaatgtctgctaaacaaagatgc
caatgacattttaaaagcctcgttgattcttagtacgtacaaagtagatcatgccactactttcaaagatgcgttcaggc
catgtattgatggtgaactgatccctgatgttccacagatcctactcaaaaataaatcctcgtcatcttctttggtattc
aattccttggacgtattgcatggagtaaataatggtgatggaggattgatccttctttatgtttctgctattcaaaacat
atccaactttaacataaacaatggtattccacatgatgtattttgcaatatattaatccctgacatcgttcattcatact
atgcgtcgagcaaaacagtatctaaagcaatgtgtggggcctacagcagtcatgacggaacaggaaaagatagccagtct
gtaattaattggtttggagactttttctttgattatccaactaaacaagttttagatacacactccaaatcttctacaaa
gagtacctaccagtacctttattcgatggattcaccctccagatttggtggaccagttccaatttggttccgtggagcaa
atcacggtgacgaattagcctgtgtgtttggtatgatgaactctactcagtccgaaaagaaactatgtcacatcgtcatg
aaatactggaccaattttgctagaactggaaacccgaattccgctgatttaccaacatggccatcttacaacagagttgt
acatgtaccatcttgtgttttgggtgatgttattgaaatcgtaagcagtttcggaagattaactggacgaaaggaaagca
cagatggcggcaagaataccgtttatcagtttctgaaggtgccttatgctaaaccaccgataggtgatcttcgttttcag
aaacctcatcctcatgacccccttattggacaatatgatgcaacggaactcggcccatcatgcatgcaaactatttcaga
agaaaataaacttttcttgtccagctcgaacgtttccgaggattgtttacatcttaacatctatgtaccccatgatataa
gcaccgtgtccagagctgtaatgatatggatacacggaggtggctgggtaattggacagggaacaatgtatgatggatct
attttggcttctacaggtgacgtcatcgttgttaccatcaactacagacttggattctttggttttatgagcactttaga
tgatcagtatccaggaaattacggactatatgacgcattggaagccataagatggacgaaaaagcatatttcaagctttg
gtggcgaccctaataagataacacttttcggtgaatcagctggtgctttcaacatattatatcttgctacttcgccttta
agcaaaggtctatttcagcgtgttattatggaaagcggaggagatttgcaaagtcggactctttatccggatataaagaa
cacttccttcgatataatgaacgaagtaggttgcatcaatgatacatatgaatttccactcgccggtgacacagttcggt
gtctcttaaatgttgatgccctcgaaatagttaaagccacgcaaaagctcagtttagctagaggtccactttcgccagct
taccaaggaacgttccgtgcatgcattgacggagaattagtgacagatgtgccagaaaaacttcttgcaaattcatcttc
cacttcttttaaagtatttacatcactagacgtcttacaaggagtaaacaacggagagggtgcttcaatcctaggaattg
tagcatctcaacaaaatacgttaaacttcaatttatcaagtggtatccctcttgattttttctgcaatttgcttatccct
tcacttactggaaacgcatataactcagacagccaagttaatcgtgctatgtgtggagcatacacagacgtcaagggatc
aatagaacagggaagggcagtccttaattggtttggcgatttcatcttcatgtatccaatgcaacaaatactagatcacc
actcaaagttatctactaagagtacttaccaatacctcttttcaaagacgccatcttataggtggtctacatccctgccg
tcttggtttcacggtgttaaccatgcagaggagttaccatgtgtctttggtttgatgaactttgttgataactacacaca
gtcggaagaaaggttatgcaacagtgtggtgaaatactggacaaattttgcaaaattcggaaatccaaatggaggaggag
atgagttgccatggtggccctcatataaagccatgaacgcctacatagatttggatgttccaataacattacatcgtgat
ttatacagaaatagacttgttctgtgggataaaactattccatttcttctttcccatcaaggtggagctgtgcaacctat
cggttaa

Protein
Protein IDpfu_aug2.0_46.1_20114.t1
Definition-
>pfu_aug2.0_46.1_20114.t1
MLFFSILLSVLCTITCEDVEIITSFGRLKGRKDIVSKGGSVVYQFLKIPYAMPPIGDLRFQKPRPHTPLSGLYDATQLGP
SCMQPISEENKLFLSNFNVSEDCLHLNIYVPHDISTVPRAVMVWIHGGGWIVGQGTMYDGSILASAGDVIVVTINYRLGF
FGFMSTLDNQYPGNYGLFDALEAIKWTKKHISSFGGDPNKITLFGESAGAFNVLYLATSPLSKGLFQRVIMESGGDIRGE
ALDPEIRNTTFQVMTDFGCLNESDVYPMTPQHIQCLRNIDADTISKATINLGTYRDEHLPTFKDAFRPCIDGELITDVPE
KLLQNLSSDSSMVFYSLDILDGINNGEGGMMIPFVEKLQNTSNFNITNGIPRGVFCDKLIPEIVALYYDSNKDVSKVMCG
AYTNLDGVEEQGRAATDWYGDFILIYPNQHVLDTHSRSSSKSTYQYVFSKSPSYQWYSLPPWFIGADHAIELPCVFGLRN
FVKNYSQSDEKLCNTVMAYWTNFAKTGNPNSDGLPYWPSYTIRNAYMDLNDHVTAKHDLYRDRLVLWDKTIPFILSKQKD
AVQPIELTSSFGRLKGRKVSLIEGENVVHQFLKIPYAKPPTGNLRFQKPHPHDNLNRLYDATEFGPSCMQLLLDNFKYYM
PNLNISEDCLHLNVYVPKDNSTLLKPVMVFIHGGGWIAGQGTLYDGSILASTGDVIVVTINYRLGFFGFMSTLNDQYPGN
YGLFDALEAIKWTKKHIQSFGGDPNEITLFGESAGAFNVLYLATSPLSRGLFQRVIIESGGDLRADAVDPEIKNTTFKVM
KAMSCISNSDSSALTSENIQCLLNKDANDILKASLILSTYKVDHATTFKDAFRPCIDGELIPDVPQILLKNKSSSSSLVF
NSLDVLHGVNNGDGGLILLYVSAIQNISNFNINNGIPHDVFCNILIPDIVHSYYASSKTVSKAMCGAYSSHDGTGKDSQS
VINWFGDFFFDYPTKQVLDTHSKSSTKSTYQYLYSMDSPSRFGGPVPIWFRGANHGDELACVFGMMNSTQSEKKLCHIVM
KYWTNFARTGNPNSADLPTWPSYNRVVHVPSCVLGDVIEIVSSFGRLTGRKESTDGGKNTVYQFLKVPYAKPPIGDLRFQ
KPHPHDPLIGQYDATELGPSCMQTISEENKLFLSSSNVSEDCLHLNIYVPHDISTVSRAVMIWIHGGGWVIGQGTMYDGS
ILASTGDVIVVTINYRLGFFGFMSTLDDQYPGNYGLYDALEAIRWTKKHISSFGGDPNKITLFGESAGAFNILYLATSPL
SKGLFQRVIMESGGDLQSRTLYPDIKNTSFDIMNEVGCINDTYEFPLAGDTVRCLLNVDALEIVKATQKLSLARGPLSPA
YQGTFRACIDGELVTDVPEKLLANSSSTSFKVFTSLDVLQGVNNGEGASILGIVASQQNTLNFNLSSGIPLDFFCNLLIP
SLTGNAYNSDSQVNRAMCGAYTDVKGSIEQGRAVLNWFGDFIFMYPMQQILDHHSKLSTKSTYQYLFSKTPSYRWSTSLP
SWFHGVNHAEELPCVFGLMNFVDNYTQSEERLCNSVVKYWTNFAKFGNPNGGGDELPWWPSYKAMNAYIDLDVPITLHRD
LYRNRLVLWDKTIPFLLSHQGGAVQPIG

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495