Gene
| Gene Model ID | pfu_aug2.0_46.1_20116 |
|---|---|
| Locus | scaffold46.1 : 378173 ... 386500 : + |
| To GenomeBrowser | scaffold46.1:378173..386500 |
| Genes list of scaffold | scaffold46.1 |
| Synonym | pfu_aug1.0_3114.1_37508 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_46.1_20116.t1 | 11 | 1 | SHIPPO-rpt | 24 | 48 | 9.2e-13 | 48.3 | 0.11 | 780.0 | 1.2 |
| pfu_aug2.0_46.1_20116.t1 | 11 | 2 | SHIPPO-rpt | 54 | 66 | 9.2e-13 | 48.3 | 0.065 | 480.0 | 1.9 |
| pfu_aug2.0_46.1_20116.t1 | 11 | 3 | SHIPPO-rpt | 141 | 164 | 9.2e-13 | 48.3 | 0.0041 | 31.0 | 5.7 |
| pfu_aug2.0_46.1_20116.t1 | 11 | 4 | SHIPPO-rpt | 172 | 197 | 9.2e-13 | 48.3 | 2.3e-07 | 0.0017 | 19.1 |
| pfu_aug2.0_46.1_20116.t1 | 11 | 5 | SHIPPO-rpt | 209 | 221 | 9.2e-13 | 48.3 | 0.085 | 630.0 | 1.5 |
| pfu_aug2.0_46.1_20116.t1 | 11 | 6 | SHIPPO-rpt | 242 | 255 | 9.2e-13 | 48.3 | 0.94 | 7000.0 | -1.8 |
| pfu_aug2.0_46.1_20116.t1 | 11 | 7 | SHIPPO-rpt | 274 | 299 | 9.2e-13 | 48.3 | 0.0012 | 8.9 | 7.4 |
| pfu_aug2.0_46.1_20116.t1 | 11 | 8 | SHIPPO-rpt | 318 | 342 | 9.2e-13 | 48.3 | 1.2e-05 | 0.088 | 13.7 |
| pfu_aug2.0_46.1_20116.t1 | 11 | 9 | SHIPPO-rpt | 350 | 374 | 9.2e-13 | 48.3 | 2.5e-05 | 0.19 | 12.7 |
| pfu_aug2.0_46.1_20116.t1 | 11 | 10 | SHIPPO-rpt | 383 | 408 | 9.2e-13 | 48.3 | 1.9e-05 | 0.14 | 13.1 |
| pfu_aug2.0_46.1_20116.t1 | 11 | 11 | SHIPPO-rpt | 415 | 428 | 9.2e-13 | 48.3 | 0.016 | 120.0 | 3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_46.1_20116.t1 | gi|676491700|ref|XP_009065680.1| | hypothetical protein LOTGIDRAFT_236494 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_46.1_20116.t1 | gi|260814181|ref|XP_002601794.1| | hypothetical protein BRAFLDRAFT_75985 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_46.1_20116.t1 | gi|390333021|ref|XP_001195223.2| | PREDICTED: uncharacterized protein LOC756458 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_46.1_20116.t1 | gi|159116720|ref|XP_001708581.1| | H-SHIPPO 1 [Giardia lamblia ATCC 50803] | 7.0e-19 |
| pfu_aug2.0_46.1_20116.t1 | gi|158296801|ref|XP_317148.4| | AGAP008318-PA [Anopheles gambiae str. PEST] | 5.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_46.1_20116.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20116.t1 atgggaaactatattgtaagtccttctggcaagcctctcacaagtttgggagacccaacgcccagtggcgccaactactt tcctagaattggtttcacaaagccatccctaccacaatattcaatagccggaaaacgcaaaacaagatcaggcaacgaca acccaggaccagctgattactccacttccggtgatttaacctggaataacaaagtgttcaaactgaaaggtcgcccaaca agtcatttcgatgaacaggcaaaaagatattgcaccgtaaatggaccatcctacaacgtacgttacggacaagtaggccg acacggccaaaaattcagcatagcccaaaaacaacactcaaacgtctatactggtccgcctgatcacagcacacaacctt gtgattctcacggatttgatacccctggtccaaactatagaccaggatcctcgcaggtggacaggggaccgaaatactcc tttggcatcgctcgtactcagtcatcttcagcaaaccctggtcccgcagattacgatctaaacacaagtagaagaggtcc ttcatactcatttggaacaaaactcccgccaccaccggctgtacagagaacggtgaacaaggacagtccatcgcctaata cctataatatcggcaccactatcggtagaaccacatcagttgtcattggggaacgtgcgcccgaaccaaaaccaaaatta gatagcccatccccagcggcatactttacaagggatatcatgaaaaataaaagagcgacaacgctagcctaccgctggtt cgataccgatgagccagcacatccgggtccggcagactataccatcaccaaggctaatctcacaaggactccgatgttct caaacaggcagaagaccaacccttcatatccggattcactcaactacactcccagagatgtagacgaacgtcctgggcca ggtgaatatgatgtgactaaaacgttcgacaataatgatgctccagcgtataaaatagcacagaaactgaataaccgcac ttctgataatccggctccaaatgcttacgaatatgagaagagatcccaaaaagatgcgcctgcattctccatgggcaaaa gatttgaaataccagatagtagagtgagtccaggaccggcgtcgtatacccctcaaaaacaagacagcaataatcccaag tactctatgacgtcccgacccacacaggaaacgaagagaggaaatcctgcacctaatgcctacaacttacagaatgcagg aaaatgcaaacaaaataatacaggaatatcacttaaaagtcgggcaagtccgtacgtctacagcgggttccataccaata agattagtgacgagattgcaccgctttacgtcgcctctaatatctaa |
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Protein
| Protein ID | pfu_aug2.0_46.1_20116.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20116.t1 MGNYIVSPSGKPLTSLGDPTPSGANYFPRIGFTKPSLPQYSIAGKRKTRSGNDNPGPADYSTSGDLTWNNKVFKLKGRPT SHFDEQAKRYCTVNGPSYNVRYGQVGRHGQKFSIAQKQHSNVYTGPPDHSTQPCDSHGFDTPGPNYRPGSSQVDRGPKYS FGIARTQSSSANPGPADYDLNTSRRGPSYSFGTKLPPPPAVQRTVNKDSPSPNTYNIGTTIGRTTSVVIGERAPEPKPKL DSPSPAAYFTRDIMKNKRATTLAYRWFDTDEPAHPGPADYTITKANLTRTPMFSNRQKTNPSYPDSLNYTPRDVDERPGP GEYDVTKTFDNNDAPAYKIAQKLNNRTSDNPAPNAYEYEKRSQKDAPAFSMGKRFEIPDSRVSPGPASYTPQKQDSNNPK YSMTSRPTQETKRGNPAPNAYNLQNAGKCKQNNTGISLKSRASPYVYSGFHTNKISDEIAPLYVASNI |
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