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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_46.1_20117
Locus scaffold46.1 : 400682 ... 429026 : +
To GenomeBrowser scaffold46.1:400682..429026
Genes list of scaffold scaffold46.1
Synonym pfu_aug1.0_4140.1_59446

Manual annotation
Transcript
Transcript IDpfu_aug2.0_46.1_20117.t1
Definition-
>pfu_aug2.0_46.1_20117.t1
atgatggcaagatcactcgtacagattttgagtttagctgctgttgtttttgtctccactgcattgaaacagtgcacaaa
ggatgatttccactacgagtatacatcatgtgattctgtgggtggaagatggagggtgtcggtaccaaaaaatcctgatc
tttgttccccagtatcctcccctgaaccacctgttagaggacagagctgtgcatatacatgtgaaccagggcagtatcta
gacatgattgcacaaaaatgtaaacagtgcccagcagggaccttctccttaggtggtggtactcgttttgatgcatggga
aacaataccctcagatttcagtgtccgcactgaaacatttgccagctttttccgttcagtggacgaaacatcctgtaatc
gctctatgtggttacctaaaggacggtatatcagttccgaggcaggagattgtgctgctgttctggtttactctgttaca
cttgtcaaagccggacatgtcaaatttgagtatcaatatacagatcaacatgccatttttcattttacaataaagaataa
tcagtgccagtcatattcatccagagataattcaaaatggccaccagaaactgaagaaggaaagtggcatgaaatgacgg
tacccctcactgctggactgaatgttcttacatggaagacaatagggatcatgtccccatctcttggatccaggaatcaa
aatccaactctcatacgcaaaatagaagtagacggagtggcctatacatcgcagtgtagcaagtgtaagaatgggacatc
cagtaaagaaggagcaaataagtgtactgtctgtgaggccaacacctactctaccagaggtgctgccagctgtacggcct
gtgacaagactacagaatactctaggagaggagcagcatcttgctcaaagagaccagcttgtacggaacatgactactat
gctatatactccccttgtgatgcaaacaaacagactaccaaaatgtataaatggattcagcctcagatgtgtcgttcaga
ccttcccaacagtgcaaagttacctcagccatcccctccctccgcatgtcccccgtgtaaccctggtcagcactttgtta
atgggtcaggctgccagttctgtccagagaaccactactccgacggcctgaagccctagagtatgtgtgggggagaggcc
acatgggtacctgcaggtaaccatatccatactcagtttggacatgataaggaagcctaccttgtcttgattctaaaaat
agatggattccgaggacctgaagacccagaacataaagttgaagtgggaactgtccagtttacatttgaaacttcttgta
atggggattgtgattttatctttttatcagattcctctggacatagtgaaattgtcagagaatttacagggactcaggct
caatctgttttcaactacaatgtgatgtacacaaagccactaactctgacttgggcattccaacgttctgaatctgataa
aacaagtgacacatcagtaactgagattgccaagatataccaggttaaagtaaccaacaccctacacggaggagccacag
aatgtcggaaatgtcccatgggagtacatcaagatggatgtatcccatgtcctaatggccactacatagataagaacacg
actacctgccagccttgtcctcagaacacggttattaaatctggtaacgagtggggagaagaatcctgtcaggaatgtgg
gcccggcctccatgccaagggaggtaaatcctgtgtgactgactgcacactcagagacccttcaggatatgtgtatgact
tcacaccaatcaagcagctacagttccttgaaggaagtccattgtttacagctagtggtacagaatactaccatggcttt
aacatctctctctgtgctgatgaaaagaccaaggctaactgtgccaacaacatgacaagtacagatgatgtgggcgatag
tagcactgatgcagttacagctatgatttgtagatctaccttagtgcctcagagagattcccactctgtggttaccacac
agtctgtgagtcttgcagactacctcaccaaaattgtgaccaatcttactcatgacactgaaatgcataagcagtatgag
agagaaggaatttcaacagacggaatggaaaatgatgttcatttttactttaaatcagaaagcaaaacagattcatgtcc
agacggtaggagcactattgtgtcattgagatgtgatcccaatcagaaatctctggatgacataacgatgccacctaaat
gttcagatggaacctgtgacggctgtacgttccatttcctctggaaaactgtccatgcttgccatgtttgctctgtcaaa
gattacgataaaatcatagcagaatgtgtagaaggggagcaaaacattcatttcagcaaaaaaagtgaaatcaatgaaac
ttcaaaacataacattcatgattttattcaactatgtaaacttcagattgccattcctgttatcctgggtattgggataa
ttctcctgatcctcctgatattctgttggcagaaaaacagaaagctggagtacaagtatatgaagttagtacagggtgga
gacaggaatgatgatgatgctgagttaccaggtgttgattcctgtggcctggaagatggcgaggaggaacactttgactc
tgttggcttcagagattccaaagggaagggattattcagtaaactgaagggaaaacggaggagtaaggatgatgaaaatc
cctttgaaactcgacacacggagaaaattccactgacgtaa
Transcript IDpfu_aug2.0_46.1_20117.t2
Definition-
>pfu_aug2.0_46.1_20117.t2
atgatggcaagatcactcgtacagattttgagtttagctgctgttgtttttgtctccactgcattgaaacagtgcacaaa
ggatgatttccactacgagtatacatcatgtgattctgtgggtggaagatggagggtgtcggtaccaaaaaatcctgatc
tttgttccccagtatcctcccctgaaccacctgttagaggacagagctgtgcatatacatgtgaaccagggcagtatcta
gacatgattgcacaaaaatgtaaacagtgcccagcagggaccttctccttaggtggtggtactcgttttgatgcatggga
aacaataccctcagatttcagtgtccgcactgaaacatttgccagctttttccgttcagtggacgaaacatcctgtaatc
gctctatgtggttacctaaaggacggtatatcagttccgaggcaggagattgtgctgctgttctggtttactctgttaca
cttgtcaaagccggacatgtcaaatttgagtatcaatatacagatcaacatgccatttttcattttacaataaagaataa
tcagtgccagtcatattcatccagagataattcaaaatggccaccagaaactgaagaaggaaagtggcatgaaatgacgg
tacccctcactgctggactgaatgttcttacatggaagacaatagggatcatgtccccatctcttggatccaggaatcaa
aatccaactctcatacgcaaaatagaagtagacggagtggcctatacatcgcagtgtagcaagtgtaagaatgggacatc
cagtaaagaaggagcaaataagtgtactgtctgtgaggccaacacctactctaccagaggtgctgccagctgtacggcct
gtgacaagactacagaatactctaggagaggagcagcatcttgctcaaagagaccagcttgtacggaacatgactactat
gctatatactccccttgtgatgcaaacaaacagactaccaaaatgtataaatggattcagcctcagatgtgtcgttcaga
ccttcccaacagtgcaaagttacctcagccatcccctccctccgcatgtcccccgtgtaaccctggtcagcactttgtta
atgggtcaggctgccagttctgtccagagaaccactactccgacggcctgaagccctagagtatgtgtgggggagaggcc
acatgggtacctgcaggtaaccatatccatactcagtttggacatgataaggaagcctaccttgtcttgattctaaaaat
agatggattccgaggacctgaagacccagaacataaagttgaagtgggaactgtccagtttacatttgaaacttcttgta
atggggattgtgattttatctttttatcagattcctctggacatagtgaaattgtcagagaatttacagggactcaggct
caatctgttttcaactacaatgtgatgtacacaaagccactaactctgacttgggcattccaacgttctgaatctgataa
aacaagtgacacatcagtaactgagattgccaagatataccaggttaaagtaaccaacaccctacacggaggagccacag
aatgtcggaaatgtcccatgggagtacatcaagatggatgtatcccatgtcctaatggccactacatagataagaacacg
actacctgccagccttgtcctcagaacacggttattaaatctggtaacgagtggggagaagaatcctgtcaggaatgtgg
gcccggcctccatgccaagggaggtaaatcctgtgtgactgactgcacactcagagacccttcaggatatgtgtatgact
tcacaccaatcaagcagctacagttccttgaaggaagtccattgtttacagctagtggtacagaatactaccatggcttt
aacatctctctctgtgctgatgaaaagaccaaggctaactgtgccaacaacatgacaagtacagatgatgtgggcgatag
tagcactgatgcagttacagctatgatttgtagatctaccttagtgcctcagagagattcccactctgtggttaccacac
agtctgtgagtcttgcagactacctcaccaaaattgtgaccaatcttactcatgacactgaaatgcataagcagtatgag
agagaaggaatttcaacagacggaatggaaaatgatgttcatttttactttaaatcagaaagcaaaacagattcatgtcc
agacggtaggagcactattgtgtcattgagatgtgatcccaatcagaaatctctggatgacataacgatgccacctaaat
gttcagatggaacctgtgacggctgtacgttccatttcctctggaaaactgtccatgcttgccatgtttgctctgtcaaa
gattacgataaaatcatagcagaatgtgtagaaggggagcaaaacattcatttcagcaaaaaaagtgaaatcaatgaaac
ttcaaaacataacattcatgattttattcaactatgtaaacttcagattgccattcctgttatcctgggtattgggataa
ttctcctgatcctcctgatattctgttggcagaaaaacagaaagctggagtacaagtatatgaagttagtacagggtgga
gacaggaatgatgatgatgctgagttaccaggtgttgattcctgtggcctggaagatggcgaggaggaacactttgactc
tgttggcttcagagattccaaagggaagggattattcagtaaactgaagggaaaacggaggagtaaggatgatgaaaatc
cctttgaaactcgacacacggagaaaattccactgacgattttgggtttgttgtgcccctttattgaacctaaggaggca
tattgtttttgtcctgtctttgtgtctgctctctctgaaaacatgaacctcgctcaaaacttttga

Protein
Protein IDpfu_aug2.0_46.1_20117.t1
Definition-
>pfu_aug2.0_46.1_20117.t1
MMARSLVQILSLAAVVFVSTALKQCTKDDFHYEYTSCDSVGGRWRVSVPKNPDLCSPVSSPEPPVRGQSCAYTCEPGQYL
DMIAQKCKQCPAGTFSLGGGTRFDAWETIPSDFSVRTETFASFFRSVDETSCNRSMWLPKGRYISSEAGDCAAVLVYSVT
LVKAGHVKFEYQYTDQHAIFHFTIKNNQCQSYSSRDNSKWPPETEEGKWHEMTVPLTAGLNVLTWKTIGIMSPSLGSRNQ
NPTLIRKIEVDGVAYTSQCSKCKNGTSSKEGANKCTVCEANTYSTRGAASCTACDKTTEYSRRGAASCSKRPACTEHDYY
AIYSPCDANKQTTKMYKWIQPQMCRSDLPNSAKLPQPSPPSACPPCNPGQHFVNGSGCQFCPENHYSDGLKPXSMCGGEA
TWVPAGNHIHTQFGHDKEAYLVLILKIDGFRGPEDPEHKVEVGTVQFTFETSCNGDCDFIFLSDSSGHSEIVREFTGTQA
QSVFNYNVMYTKPLTLTWAFQRSESDKTSDTSVTEIAKIYQVKVTNTLHGGATECRKCPMGVHQDGCIPCPNGHYIDKNT
TTCQPCPQNTVIKSGNEWGEESCQECGPGLHAKGGKSCVTDCTLRDPSGYVYDFTPIKQLQFLEGSPLFTASGTEYYHGF
NISLCADEKTKANCANNMTSTDDVGDSSTDAVTAMICRSTLVPQRDSHSVVTTQSVSLADYLTKIVTNLTHDTEMHKQYE
REGISTDGMENDVHFYFKSESKTDSCPDGRSTIVSLRCDPNQKSLDDITMPPKCSDGTCDGCTFHFLWKTVHACHVCSVK
DYDKIIAECVEGEQNIHFSKKSEINETSKHNIHDFIQLCKLQIAIPVILGIGIILLILLIFCWQKNRKLEYKYMKLVQGG
DRNDDDAELPGVDSCGLEDGEEEHFDSVGFRDSKGKGLFSKLKGKRRSKDDENPFETRHTEKIPLT
Protein IDpfu_aug2.0_46.1_20117.t2
Definition-
>pfu_aug2.0_46.1_20117.t2
MMARSLVQILSLAAVVFVSTALKQCTKDDFHYEYTSCDSVGGRWRVSVPKNPDLCSPVSSPEPPVRGQSCAYTCEPGQYL
DMIAQKCKQCPAGTFSLGGGTRFDAWETIPSDFSVRTETFASFFRSVDETSCNRSMWLPKGRYISSEAGDCAAVLVYSVT
LVKAGHVKFEYQYTDQHAIFHFTIKNNQCQSYSSRDNSKWPPETEEGKWHEMTVPLTAGLNVLTWKTIGIMSPSLGSRNQ
NPTLIRKIEVDGVAYTSQCSKCKNGTSSKEGANKCTVCEANTYSTRGAASCTACDKTTEYSRRGAASCSKRPACTEHDYY
AIYSPCDANKQTTKMYKWIQPQMCRSDLPNSAKLPQPSPPSACPPCNPGQHFVNGSGCQFCPENHYSDGLKPXSMCGGEA
TWVPAGNHIHTQFGHDKEAYLVLILKIDGFRGPEDPEHKVEVGTVQFTFETSCNGDCDFIFLSDSSGHSEIVREFTGTQA
QSVFNYNVMYTKPLTLTWAFQRSESDKTSDTSVTEIAKIYQVKVTNTLHGGATECRKCPMGVHQDGCIPCPNGHYIDKNT
TTCQPCPQNTVIKSGNEWGEESCQECGPGLHAKGGKSCVTDCTLRDPSGYVYDFTPIKQLQFLEGSPLFTASGTEYYHGF
NISLCADEKTKANCANNMTSTDDVGDSSTDAVTAMICRSTLVPQRDSHSVVTTQSVSLADYLTKIVTNLTHDTEMHKQYE
REGISTDGMENDVHFYFKSESKTDSCPDGRSTIVSLRCDPNQKSLDDITMPPKCSDGTCDGCTFHFLWKTVHACHVCSVK
DYDKIIAECVEGEQNIHFSKKSEINETSKHNIHDFIQLCKLQIAIPVILGIGIILLILLIFCWQKNRKLEYKYMKLVQGG
DRNDDDAELPGVDSCGLEDGEEEHFDSVGFRDSKGKGLFSKLKGKRRSKDDENPFETRHTEKIPLTILGLLCPFIEPKEA
YCFCPVFVSALSENMNLAQNF

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