Gene
| Gene Model ID | pfu_aug2.0_46.1_20119 |
|---|---|
| Locus | scaffold46.1 : 440543 ... 450191 : - |
| To GenomeBrowser | scaffold46.1:440543..450191 |
| Genes list of scaffold | scaffold46.1 |
| Synonym | pfu_aug1.0_4140.1_59443 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_46.1_20119.t1 | 1 | 1 | 2-Hacid_dh_C | 116 | 293 | 0.0 | 156.1 | 0.0 | 0.0 | 155.6 |
| pfu_aug2.0_46.1_20119.t1 | 1 | 1 | NAD_binding_2 | 153 | 258 | 8.5e-07 | 28.9 | 4.6e-10 | 1.7e-06 | 27.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_46.1_20119.t1 | gi|676439859|ref|XP_009048988.1| | hypothetical protein LOTGIDRAFT_238595 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_46.1_20119.t1 | gi|524898101|ref|XP_005105504.1| | PREDICTED: glyoxylate reductase/hydroxypyruvate reductase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_46.1_20119.t1 | gi|195999430|ref|XP_002109583.1| | hypothetical protein TRIADDRAFT_53759 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_46.1_20119.t1 | gi|645002197|ref|XP_001606634.2| | PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_46.1_20119.t1 | gi|673017370|ref|XP_008862646.1| | hypothetical protein H310_01345 [Aphanomyces invadans] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_46.1_20119.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20119.t1 atgacaggccgggtaccatgtattttcctcgctagcagagtacctagattataccaggcaacaaggaatatactaccgtc ttatgaatttaatgaagttaagatagacaatgaaggaaagataaccgatgcagacaaggcagttttactagaaaaagccg aaatcttatttgctgacctccctgttatcaatgaaatagtagggaaggcacccaaactgaaatgggcacaaagcacatgg gcgggagtggaaacgattataaaaagtttacctcagcctccagatggcgtgacaatcacccgaatgggagacggatttgg ttcattgatggcagaatatgtgcttggccaaataatcagccgagaaagattttttaccgttatggtggaggctcaaaagc aaagtgtctgggacaaatctaaagtaatcaatataagaccattgtcaagtctaacggcagggattcttggtgtcggccaa ataggaacggaaatcgctcggcttttacgttctgttgggatgacaacatggggtttgggacgcaatgaaagaaaacataa acctccagaattcaatgttgtcaagacaaccaacgacatgacagaatttttacagagctgtgactatttaataaatgtct taccaagtactgcttccaccaaaaatctactctctggagatactctaaaacaatgcaacaaaagtccgtgctttataaat gtagggagaggagatatcattgatgacgggtcccttttaaaagctttaaaaaatgattggttgagtggtgctattttgga tgtggtcaaccaggagccactacctcaagacagtcctttatggtctacaccaaatgttgttataactccacatatatcag ggccgtgcttggcagagccgctagcggatgccttcgcaagaaatctgtccaactacctcgaaggaaagccactagactac gagatcaaatgggacgtcgggtattga |
|
Protein
| Protein ID | pfu_aug2.0_46.1_20119.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20119.t1 MTGRVPCIFLASRVPRLYQATRNILPSYEFNEVKIDNEGKITDADKAVLLEKAEILFADLPVINEIVGKAPKLKWAQSTW AGVETIIKSLPQPPDGVTITRMGDGFGSLMAEYVLGQIISRERFFTVMVEAQKQSVWDKSKVINIRPLSSLTAGILGVGQ IGTEIARLLRSVGMTTWGLGRNERKHKPPEFNVVKTTNDMTEFLQSCDYLINVLPSTASTKNLLSGDTLKQCNKSPCFIN VGRGDIIDDGSLLKALKNDWLSGAILDVVNQEPLPQDSPLWSTPNVVITPHISGPCLAEPLADAFARNLSNYLEGKPLDY EIKWDVGY |
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