Gene
| Gene Model ID | pfu_aug2.0_46.1_20122 |
|---|---|
| Locus | scaffold46.1 : 577222 ... 607189 : + |
| To GenomeBrowser | scaffold46.1:577222..607189 |
| Genes list of scaffold | scaffold46.1 |
| Synonym | pfu_aug1.0_6582.1_38372 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_46.1_20122.t1 | 4 | 1 | DUF4551 | 1 | 87 | 0.0 | 457.1 | 2.5e-31 | 3.7e-27 | 94.9 |
| pfu_aug2.0_46.1_20122.t1 | 4 | 2 | DUF4551 | 124 | 313 | 0.0 | 457.1 | 3.5e-10 | 5.2e-06 | 25.1 |
| pfu_aug2.0_46.1_20122.t1 | 4 | 3 | DUF4551 | 266 | 327 | 0.0 | 457.1 | 0.061 | 900.0 | -2.1 |
| pfu_aug2.0_46.1_20122.t1 | 4 | 4 | DUF4551 | 443 | 841 | 0.0 | 457.1 | 0.0 | 0.0 | 341.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_46.1_20122.t1 | gi|676495131|ref|XP_009066789.1| | hypothetical protein LOTGIDRAFT_223226 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_46.1_20122.t1 | gi|524868225|ref|XP_005090917.1| | PREDICTED: uncharacterized protein C12orf56 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_46.1_20122.t1 | gi|390346022|ref|XP_003726460.1| | PREDICTED: uncharacterized protein C12orf56 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_46.1_20122.t1 | gi|260798881|ref|XP_002594428.1| | hypothetical protein BRAFLDRAFT_119956 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_46.1_20122.t1 | gi|584049960|ref|XP_006769692.1| | PREDICTED: uncharacterized protein C12orf56 homolog [Myotis davidii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_46.1_20122.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20122.t1 atggcgcgtggaacttcagacgcgctgttcaaaaagaacacgaagctggaaagttatttgaaacgaactttgccagaaga agcgttcgatcgagtgcgtgcttacgaatcgtgcattattgtatcggaaaaagaaaataaggccttcaaatactgtgttc tagacgatgaatatatttatttaacagaaaacccacctaaaaatcctcaggacattcaagcggtagtctcattaaaggac atcacctctgttgaaatggtttgttttattttttgtttgtacatgttgtatttgtttcatacatgtgtcggagcagcttc cgtacagtcgtcctttacaagattttactcaaaagccacttaccaacgggtaaatgattttcctgacttcttaagtggtg aagaaagggacaatactcagcatctaagaattactcattggacttcagcaaatgctaaaagacgatcattccgcaagcca aaaaagtcgcctagatcaggctcagtttctgatctccatggtgaccgctcaaatgcttcaactcctttggactttacaga gagtagcaatttatcagaagactatggatatatcacacagagtatgtccagtttacaggtcagcagaccagagagtaggg ggtctatctcctctagccagggacttaaagcagggggcagggagattaaaacagggagcatagggaaaaagaaaaagcgt atgagtgatagcatggaggagagtgtattaaagtcattaaaagaagagttggaggatggacaacttgaagatattgaaga aactgatggcacattttcctcatcttatttatcaatgggatttaagtctggtaggaaaacatcaacaactagtgccaaaa aggaaacaaaatcaactagaaaaaagtcagaagatactacgagtcaaactgggtcagtacgccaattgcctagttatcca ccaagcaaaccagcttttgatttgcctgcttctaacaatgatgttgtcaccaaagatgataagaacttcaatgctttaaa tgatgaagatgaatctcaaaagccaaatttctgttcatattttctctgttttcgctcggggaaggtctcctgtgggaggg atgaatctgtaaatgaagacgctttcaaaaagcctataccagttgacactgagactatgaatagtcttaataagcaaaat tcaaccgataaaagagatttgttcattatcaataagccagaaataaacatagatgctacatctgagtcagggagtcgaca agggtttagggggtctgttccatccctccatgaccctgcccctccatccaggcgttcatccatcacaactttacggggac agtcaagggcaggaactcctgctctggaaaatgaggcaactcggagtggaagcaaccttggttttgcctccatgtcagat tatggtggttcagtgaatggtctatcaatgctgggagtggagggcgtgtcggagaggagaaaggtggtgcttaatatcta cttgctcaacatccactcccccatgctcatgttgataaggagtgcctggagtaactacctcattagatgtaccctaaaca ttgacactgtttcaaagtccaatgttataagaagtggccaaattcagagggaaaggatggaaatgttattcaaccaatta aaacgtgaattattgaatccggcgaacggacttgaagataactttacattattggtggaacttagaaattcaactctaaa aaactttgctataaaaaagcttttctggaagaattcggatatgtttgtatttatggtgaggcagcttcagagataccttc ccaagtctcctgtcaatgttaacacagagcatggacgtgtccagagggctgacgaattagaaatgattgtgactttggta gaaattctcatcatcatgttcagagaaacagaaatcataccccacagaatcatgacgttaaaggcagacaggggtaagcc attgtttgatttactgagagtgttggtctgcttcccggagattccagagaaggatgccgctccatcaagcaaaggctcgg acgaggagatacagaatttgattgctgagttttctcgagtcggtatgacggctgtatttgagattttcctaatggcccag caagctaactggagttacagcgagggaagtttcttcaacattagctggatcatgaaaatgttcgaagaaatgaaaactac ggaaccgtttgtagaaaaggtccttacgagcttattgaagtttataggtcccactcagacagagccgttaactcccaagg aggcagtgttactatatacacagttctcagtactacagatattcttacagtatagtcccagaatggcagcctttatacgt aataattatctggaagagttcaaatatttcattcaggttccaattgtgatgaagaagattcccaaatcttatcctatagg agcgatcacagttactttaatagactctgtaacatcgagggtactggatacgtcacgcgccacagcagccggaaaatctc caagcaaagctggcattataactgttcagagcattccatga |
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Protein
| Protein ID | pfu_aug2.0_46.1_20122.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_46.1_20122.t1 MARGTSDALFKKNTKLESYLKRTLPEEAFDRVRAYESCIIVSEKENKAFKYCVLDDEYIYLTENPPKNPQDIQAVVSLKD ITSVEMVCFIFCLYMLYLFHTCVGAASVQSSFTRFYSKATYQRVNDFPDFLSGEERDNTQHLRITHWTSANAKRRSFRKP KKSPRSGSVSDLHGDRSNASTPLDFTESSNLSEDYGYITQSMSSLQVSRPESRGSISSSQGLKAGGREIKTGSIGKKKKR MSDSMEESVLKSLKEELEDGQLEDIEETDGTFSSSYLSMGFKSGRKTSTTSAKKETKSTRKKSEDTTSQTGSVRQLPSYP PSKPAFDLPASNNDVVTKDDKNFNALNDEDESQKPNFCSYFLCFRSGKVSCGRDESVNEDAFKKPIPVDTETMNSLNKQN STDKRDLFIINKPEINIDATSESGSRQGFRGSVPSLHDPAPPSRRSSITTLRGQSRAGTPALENEATRSGSNLGFASMSD YGGSVNGLSMLGVEGVSERRKVVLNIYLLNIHSPMLMLIRSAWSNYLIRCTLNIDTVSKSNVIRSGQIQRERMEMLFNQL KRELLNPANGLEDNFTLLVELRNSTLKNFAIKKLFWKNSDMFVFMVRQLQRYLPKSPVNVNTEHGRVQRADELEMIVTLV EILIIMFRETEIIPHRIMTLKADRGKPLFDLLRVLVCFPEIPEKDAAPSSKGSDEEIQNLIAEFSRVGMTAVFEIFLMAQ QANWSYSEGSFFNISWIMKMFEEMKTTEPFVEKVLTSLLKFIGPTQTEPLTPKEAVLLYTQFSVLQIFLQYSPRMAAFIR NNYLEEFKYFIQVPIVMKKIPKSYPIGAITVTLIDSVTSRVLDTSRATAAGKSPSKAGIITVQSIP |
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