Gene
| Gene Model ID | pfu_aug2.0_4610.1_02640 |
|---|---|
| Locus | scaffold4610.1 : 1 ... 13052 : + |
| To GenomeBrowser | scaffold4610.1:1..13052 |
| Genes list of scaffold | scaffold4610.1 |
| Synonym | pfu_aug1.0_20123.1_33070 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| betaine--homocysteine s-methyltransferase 1-like | GO:0008152 GO:0008172 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4610.1_02640.t1 | 2 | 1 | S-methyl_trans | 47 | 97 | 2.6e-19 | 69.6 | 0.019 | 140.0 | 1.5 |
| pfu_aug2.0_4610.1_02640.t1 | 2 | 2 | S-methyl_trans | 109 | 284 | 2.6e-19 | 69.6 | 2.6e-22 | 2.0e-18 | 66.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4610.1_02640.t1 | gi|676470156|ref|XP_009058764.1| | hypothetical protein LOTGIDRAFT_217867 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4610.1_02640.t1 | gi|676470158|ref|XP_009058765.1| | hypothetical protein LOTGIDRAFT_233748 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4610.1_02640.t1 | gi|676429312|ref|XP_009045559.1| | hypothetical protein LOTGIDRAFT_230320 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4610.1_02640.t1 | gi|524864996|ref|XP_005089330.1| | PREDICTED: S-methylmethionine--homocysteine S-methyltransferase BHMT2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_4610.1_02640.t1 | gi|585648195|ref|XP_006814175.1| | PREDICTED: uncharacterized protein LOC100371248 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4610.1_02640.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4610.1_02640.t1 ggtcctatagcagccttgccggtgccataccgtaccacacctgaacagcccaccttcttctccctgactgtcccttacac agataaaaaggcttttcctttagacctgcaatcctgccaatgttctcgagaggagatttatcattttgctactgaatgta aaaatatggggatcctgtacgtcggtttgtgttgtggaaactcgtctaaccttctcagaatctttgcggaagtgtatgga aagcctgcgcctgcgcttcaatattcaccggaaatggagaaacattacatattcggtgacaagaagaagtttaacagcta cttcacgtactacgcccacagggaaaagttgcggcttattggaagagagaatgatattgaagcagtcaatatgaaagctt tgaaaatagcgcgggaagtagcagacgagacaggcaccctgatggcgggaaacatctgcaatacaactgtttacatgaga gacaacccagaagccattcagaaagcaaagaaaatgaataaggagcagatagaatgggcagtgaaagggggtgcagactt catagtgggagagacgtacggcgagtttggtgaagctatgcttgcattagaatctatcaaagaatatggaaatggtctac cagctgttattactttatctgtaccgatgactaatgtcttacacgacggcgtaccaatcgacgaagcatgccgaaagttg gaggacgcaggtgcagcggttgttggactaaattgtgggcgtggtcctaaaactatgttagagagtctcagacttgtcaa agcagcttgtaagggtcctatagcagccctgccggtgccataccgtaccacacctgaacaaccaaccttcttctccctga ctgtcccttacacagataaaatggctttccctttggaccttcattcttgcctatgctcccgtgaagagatttacaatttt gctactgaatgtaagaatatggggatccagtacgtcggtttgtgttgtggaaactcatctaaccttctcagaatcctacc ggaagtatatgagaaacctgcgcctgcgctcaaatattcaccggaaatggagaaacatttcatctttggtgacaagaaaa aattcagcaattactacacagaaacttacaagtcaaaaatcacagaaaaataa |
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Protein
| Protein ID | pfu_aug2.0_4610.1_02640.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4610.1_02640.t1 GPIAALPVPYRTTPEQPTFFSLTVPYTDKKAFPLDLQSCQCSREEIYHFATECKNMGILYVGLCCGNSSNLLRIFAEVYG KPAPALQYSPEMEKHYIFGDKKKFNSYFTYYAHREKLRLIGRENDIEAVNMKALKIAREVADETGTLMAGNICNTTVYMR DNPEAIQKAKKMNKEQIEWAVKGGADFIVGETYGEFGEAMLALESIKEYGNGLPAVITLSVPMTNVLHDGVPIDEACRKL EDAGAAVVGLNCGRGPKTMLESLRLVKAACKGPIAALPVPYRTTPEQPTFFSLTVPYTDKMAFPLDLHSCLCSREEIYNF ATECKNMGIQYVGLCCGNSSNLLRILPEVYEKPAPALKYSPEMEKHFIFGDKKKFSNYYTETYKSKITEK |
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