Gene
| Gene Model ID | pfu_aug2.0_4628.1_29326 |
|---|---|
| Locus | scaffold4628.1 : 12846 ... 31869 : + |
| To GenomeBrowser | scaffold4628.1:12846..31869 |
| Genes list of scaffold | scaffold4628.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4628.1_29326.t1 | 1 | 1 | ATP_bind_4 | 53 | 139 | 3.8e-14 | 52.5 | 1.3e-17 | 6.2e-14 | 51.8 |
| pfu_aug2.0_4628.1_29326.t1 | 2 | 1 | Cu-oxidase_3 | 228 | 248 | 3.2e-31 | 107.5 | 1.4 | 6800.0 | -3.3 |
| pfu_aug2.0_4628.1_29326.t1 | 2 | 2 | Cu-oxidase_3 | 268 | 371 | 3.2e-31 | 107.5 | 1.6e-34 | 7.8e-31 | 106.2 |
| pfu_aug2.0_4628.1_29326.t1 | 2 | 1 | Cu-oxidase | 334 | 354 | 3.7e-15 | 56.1 | 0.75 | 3700.0 | -2.4 |
| pfu_aug2.0_4628.1_29326.t1 | 2 | 2 | Cu-oxidase | 377 | 502 | 3.7e-15 | 56.1 | 2.7e-18 | 1.3e-14 | 54.3 |
Transcript
| Transcript ID | pfu_aug2.0_4628.1_29326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4628.1_29326.t1 atgagtgggccaaactataatgacaagtgtcccttgtcctttagtgacttacctcggcgtcaaggaaggacacgtcatac tgcgacgtcattggctgaagttagtaccaggaggactatacagggtgggtctatagcaactgataaagattacacagaaa caactgatgatgaggtagaagatctgtaccagcttctgcttgaggtcaaggagaaacatgatatagaggccgtgtctgta ggtgctgtgttgtcaaattatcagcgtgttagagtagaaaatgtctgtcagagacttggtttgacatcactaggctatct gtggagaaggaaccaagcagaacttctaaatgagatgattcagtgtggggtagaggccatcctcataaaagtagcctcct taggtcagcaaaataagatgatccagtgtggggtagaggccattctcataaaagtggcctccttaggtaggtcagctaat ggagattatacagtggggggtagatgcaatcctcataaatgtggcctccctagtgtgttaaacatcatgaagaacagatt agttagcctcattctcctagcattgcttctccacaatattgaggcattcgaatgcgacaggacagcaacaacatgtgaga caaagctcgtaataagtcattttgtaactatggtatacccaacagaaagagcagtttacccttcagatggaaaattgtac agatatgacgtcacagatacgtcagctgcgacgccgataaatgcatctgaagttatcataggagatggattcgaacagaa agaactggtcgttgtttttaatatgtcaatgccgggacctggcataatcatgtatgagggacagagactccttatgacag tagtaaatgagctttattccgaagcagtcacggttcactggcatagacttccacaacgaggattgccgtacatggatggt gtacctttcattacacaatgtcccatcgaaccgggtacctctttccagtatgatttcattgcaagaccaagcggaacata ctggtactattccaatatgggcgggaaacgaaccgggggcgcatttggagcacttatcatacgtgaaaatgaatcaaact ccctcgaagagcacatcatacaaattcaagattggagtcataattatgttactgatttagcatttcaacaatggaagaat ggcggtgtcatcaatagatctcgagagccaaacccacaaatattggatggatcaattttgaatttcatcagtatcgattc tgctttaataaatgggaaaggtcgttttaaatcgacagagacaaatgattacaactccacaccacttgaggtttataatg tcaaattgggaagacaataccgatttagaatagtaggtgtagggtcgtcacatctatttcgtgtatcggttgacaatcat atactaactgttgttgccacagacggctatgacgtcagacctattgaatatgagtcatttatcatacgtttgtacatccc ggggagagatatgactttatattga |
|
Protein
| Protein ID | pfu_aug2.0_4628.1_29326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4628.1_29326.t1 MSGPNYNDKCPLSFSDLPRRQGRTRHTATSLAEVSTRRTIQGGSIATDKDYTETTDDEVEDLYQLLLEVKEKHDIEAVSV GAVLSNYQRVRVENVCQRLGLTSLGYLWRRNQAELLNEMIQCGVEAILIKVASLGQQNKMIQCGVEAILIKVASLGRSAN GDYTVGGRCNPHKCGLPSVLNIMKNRLVSLILLALLLHNIEAFECDRTATTCETKLVISHFVTMVYPTERAVYPSDGKLY RYDVTDTSAATPINASEVIIGDGFEQKELVVVFNMSMPGPGIIMYEGQRLLMTVVNELYSEAVTVHWHRLPQRGLPYMDG VPFITQCPIEPGTSFQYDFIARPSGTYWYYSNMGGKRTGGAFGALIIRENESNSLEEHIIQIQDWSHNYVTDLAFQQWKN GGVINRSREPNPQILDGSILNFISIDSALINGKGRFKSTETNDYNSTPLEVYNVKLGRQYRFRIVGVGSSHLFRVSVDNH ILTVVATDGYDVRPIEYESFIIRLYIPGRDMTLY |
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