Gene
| Gene Model ID | pfu_aug2.0_464.1_14178 |
|---|---|
| Locus | scaffold464.1 : 11306 ... 45431 : + |
| To GenomeBrowser | scaffold464.1:11306..45431 |
| Genes list of scaffold | scaffold464.1 |
| Synonym | pfu_aug1.0_12679.1_39368 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein phosphatase 2a regulatory subunit b subunit alpha isoform x2 | GO:0000159 GO:0001754 GO:0003682 GO:0005509 GO:0005515 GO:0006470 GO:0007525 GO:0008285 GO:0008601 GO:0045732 GO:0050790 GO:0090090 GO:0090249 GO:0090263 GO:2000134 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_464.1_14178.t2 | 6 | 1 | EF-hand_1 | 356 | 372 | 4.6e-08 | 31.7 | 0.021 | 63.0 | 3.2 |
| pfu_aug2.0_464.1_14178.t2 | 5 | 1 | EF-hand_6 | 356 | 371 | 9.6e-07 | 28.1 | 0.17 | 500.0 | 1.0 |
| pfu_aug2.0_464.1_14178.t2 | 3 | 1 | EF-hand_7 | 413 | 454 | 6.5e-19 | 67.8 | 0.022 | 66.0 | 3.7 |
| pfu_aug2.0_464.1_14178.t2 | 6 | 2 | EF-hand_1 | 445 | 454 | 4.6e-08 | 31.7 | 0.17 | 500.0 | 0.4 |
| pfu_aug2.0_464.1_14178.t2 | 5 | 2 | EF-hand_6 | 445 | 455 | 9.6e-07 | 28.1 | 0.12 | 350.0 | 1.5 |
| pfu_aug2.0_464.1_14178.t2 | 3 | 2 | EF-hand_7 | 490 | 583 | 6.5e-19 | 67.8 | 3.3e-20 | 9.7e-17 | 60.8 |
| pfu_aug2.0_464.1_14178.t2 | 6 | 3 | EF-hand_1 | 490 | 507 | 4.6e-08 | 31.7 | 0.0031 | 9.1 | 5.8 |
| pfu_aug2.0_464.1_14178.t2 | 5 | 3 | EF-hand_6 | 493 | 508 | 9.6e-07 | 28.1 | 0.0013 | 3.9 | 7.6 |
| pfu_aug2.0_464.1_14178.t2 | 6 | 4 | EF-hand_1 | 536 | 547 | 4.6e-08 | 31.7 | 0.24 | 700.0 | -0.1 |
| pfu_aug2.0_464.1_14178.t2 | 6 | 5 | EF-hand_1 | 560 | 580 | 4.6e-08 | 31.7 | 5.1e-06 | 0.015 | 14.5 |
| pfu_aug2.0_464.1_14178.t2 | 5 | 4 | EF-hand_6 | 561 | 582 | 9.6e-07 | 28.1 | 0.00016 | 0.47 | 10.4 |
| pfu_aug2.0_464.1_14178.t2 | 3 | 3 | EF-hand_7 | 617 | 625 | 6.5e-19 | 67.8 | 4.6 | 14000.0 | -3.7 |
| pfu_aug2.0_464.1_14178.t2 | 6 | 6 | EF-hand_1 | 617 | 626 | 4.6e-08 | 31.7 | 1.6 | 4600.0 | -2.6 |
| pfu_aug2.0_464.1_14178.t2 | 5 | 5 | EF-hand_6 | 617 | 626 | 9.6e-07 | 28.1 | 1.1 | 3200.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_464.1_14178.t2 | gi|507620046|ref|XP_004625057.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X2 [Octodon degus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_464.1_14178.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_464.1_14178.t1 atggccttgaagccggtattgaaaaacaaagttgacgaattgtttctacgttggctcagcgaagccgatactcaagttac actgaaggaaaatctacggcagttagccaatggagaaaatctatcccagccttcaccgtacctctctgtgacatcgtccc gagggtcggggaaacactcccccagggtcagaccaggttcaccaccctccgctccaactaataaactaccaagtccacgc agtccacgtcgcccactgacaaacaaaagtaatcacaagactgttaatggaagctcaaagcgaccgtatgcggaggtgcg atacgtttgctctagagtcacaattcatcacaatagtcgcgtggaactcaaatggaaacgatcgttacatcattgtgccc agtgtgacgtaggcgggacgtacagagggtgggggatatcgtgtggtgctatacattacggacggtgtacccccgttaca tttcccttcccccagaactacaatgttaacaggcggaagggtaacggtcaaggcgtcatccccgtggccaaagtcattcc tacgaggtctgtgcgggcacagccggaggaagtgtccgtggtggacggtgggcaggaaaaaccttatgataccaataaaa agtcgacattgtcagtgccaaacagcaataaagatggtcgagaaatcattccaaaagactcttcgtcaaacgatatcatc agctcgcagaaggacaagggcaaggaaaacaaagagttatctccctctagcactacagccacccccaccgttacaacaat tacaatatctgacaaaaaagacaaaacgaaaaaaccggacattaataaatataggaacgttaatagtgctagcataccca aattttatttcccgtacggacgtcctgcgacaggcgaacagactgacagtctgatgaagaacgcattagaggagatagct aaactaccagatggtaaagtctacaagcaccaaatgggaaatatagtcaaggcgtgtaacctacctctttattggaaagc tttgctcttccatgcatcagggggagataagcaaggatatatcacccaacagtctttcactgccatgtggaaaagaattt tccattcctgccatgatgaagcggctaggtttgttaagctgtccaccaaaccaggctgtagtcatctcactgaggatgac ttccttccactagtccaggatgttgtggatacacatccaggtttgacttttctacgagaggcgccggaattccattcacg atatgtaaatacggtcatagcaagaatattttataatgtaaacagatcctggaacggtaaaatcacgataacggaactca ggaaaagtaatttcttacagacgctagctttattggaacaagaagacgatataaatgtgattgtggactttttctcttat gaacatttttacgttatttattgtaaattttgggagttagataaggaccatgatttgtacatagataaagccgatcttgc cagacataatgatcatgccatgtcaatgcgagttatagatagaattttctcaggatctgtaatgagagggaagtctttaa cagaaggcaagatgagttatcctgaatttgtatggtttctgatatcagaggaagataaaaaacatcctacaagtgtagag tactggttccgctgtatggatatcgacggtgatggtgttatatctatgtatgaaatggaattcttctacgaggagcaaat gcagaaaatggagtccatgggcattgaaaaattaccatttgaagactgcctttgtcagatgttagatttggtgcgaccta gagaagaaggaaagataactcttgcagatcttaagaattgtaaaatgaccaacattttctttgatacattcttaaacttg gataaattcctagaacatgaacaaagagatccattcagtaatataaggagaatttttgaaaggaactgtcatttgaaaga aggcactatgaagacgactttgagcctgaagatgacgaagtga |
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| Transcript ID | pfu_aug2.0_464.1_14178.t2 |
| Definition | - |
>pfu_aug2.0_464.1_14178.t2 atggccttgaagccggtattgaaaaacaaagttgacgaattgtttctacgttggctcagcgaagccgatactcaagttac actgaaggaaaatctacggcagttagccaatggagaaaatctatcccagccttcaccgtacctctctgtgacatcgtccc gagggtcggggaaacactcccccagggtcagaccaggttcaccaccctccgctccaactaataaactaccaagtccacgc agtccacgtcgcccactgacaaacaaaagtaatcacaagactgttaatggaagctcaaagcgaccgtatgcggaggtgcg atacgtttgctctagagtcacaattcatcacaatagtcgcgtggaactcaaatggaaacgatcgttacatcattgtgccc agtgtgacgtaggcgggacgtacagagggtgggggatatcgtgtggtgctatacattacggacggtgtacccccgttaca tttcccttcccccagaactacaatgttaacaggcggaagggtaacggtcaaggcgtcatccccgtggccaaagtcattcc tacgaggtctgtgcgggcacagccggaggaagtgtccgtggtggacggtgggcaggaaaaaccttatgataccaataaaa agtcgacattgtcagtgccaaacagcaataaagatggtcgagaaatcattccaaaagactcttcgtcaaacgatatcatc agctcgcagaaggacaagggcaaggaaaacaaagagttatctccctctagcactacagccacccccaccgttacaacaat tacaatatctgacaaaaaagacaaaacgaaaaaaccggacattaataaatataggaacgttaatagtgctagcataccca aattttatttcccgtacggacgtcctgcgacaggcgaacagactgacagtctgatgaagaacgcattagaggagatagct aaactaccagatggtaaagtctacaagcaccaaatgggaaatatagtcaaggcgtgtaacctacctctttattggaaagc tttgctcttccatgcatcagggggagataagcaaggatatatcacccaacagtctttcactgccatgtggaaaagaattt tccattcctgccatgatgaagcggctaggtttgttaagctgtccaccaaaccaggctgtagtcatctcactgaggatgac ttccttccactagtccaggatgttgtggatacacatccaggtttgacttttctacgagaggcgccggaattccattcacg atatgtaaatacggtcatagcaagaatattttataatgtaaacagatcctggaacggtaaaatcacgataacggaactca ggaaaagtaatttcttacagacgctagctttattggaacaagaagacgatataaatgtgattgtggactttttctcttat gaacatttttacgttatttattgtaaattttgggagttagataaggaccatgatttgtacatagataaagccgatcttgc cagacataatgatcatgccatgtcaatgcgagttatagatagaattttctcaggatctgtaatgagagggaagtctttaa cagaaggcaagatgagttatcctgaatttgtatggtttctgatatcagaggaagataaaaaacatcctacaagtgtagag tactggttccgctgtatggatatcgacggtgatggtgttatatctatgtatgaaatggaattcttctacgaggagcaaat gcagaaaatggagtccatgggcattgaaaaattaccatttgaagactgcctttgtcagatgttagatttggtgcgaccta gagaagaaggaaagataactcttgcagatcttaagaattgtaaaatgaccaacattttctttgatacattcttaaacttg gataaattcctagaacatgaacaaagagatccattcagtaatataaggagaatttttgaaaggaactgtcatttgaaaga aggagatggattattctttgaaagttgtgactctccctcaagtccccaactgaggcactatgaagacgactttgagcctg aagatgacgaagtgaatcaagaggaagaaaaatcaaatcgttcaacgaagcgaactgactctcccgcgctacgcacacag acaaacatgaaacttggaggcaaagacgatgacatctatgatttcagttctgaaaatctgggttactga |
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Protein
| Protein ID | pfu_aug2.0_464.1_14178.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_464.1_14178.t1 MALKPVLKNKVDELFLRWLSEADTQVTLKENLRQLANGENLSQPSPYLSVTSSRGSGKHSPRVRPGSPPSAPTNKLPSPR SPRRPLTNKSNHKTVNGSSKRPYAEVRYVCSRVTIHHNSRVELKWKRSLHHCAQCDVGGTYRGWGISCGAIHYGRCTPVT FPFPQNYNVNRRKGNGQGVIPVAKVIPTRSVRAQPEEVSVVDGGQEKPYDTNKKSTLSVPNSNKDGREIIPKDSSSNDII SSQKDKGKENKELSPSSTTATPTVTTITISDKKDKTKKPDINKYRNVNSASIPKFYFPYGRPATGEQTDSLMKNALEEIA KLPDGKVYKHQMGNIVKACNLPLYWKALLFHASGGDKQGYITQQSFTAMWKRIFHSCHDEAARFVKLSTKPGCSHLTEDD FLPLVQDVVDTHPGLTFLREAPEFHSRYVNTVIARIFYNVNRSWNGKITITELRKSNFLQTLALLEQEDDINVIVDFFSY EHFYVIYCKFWELDKDHDLYIDKADLARHNDHAMSMRVIDRIFSGSVMRGKSLTEGKMSYPEFVWFLISEEDKKHPTSVE YWFRCMDIDGDGVISMYEMEFFYEEQMQKMESMGIEKLPFEDCLCQMLDLVRPREEGKITLADLKNCKMTNIFFDTFLNL DKFLEHEQRDPFSNIRRIFERNCHLKEGTMKTTLSLKMTK |
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| Protein ID | pfu_aug2.0_464.1_14178.t2 |
| Definition | - |
>pfu_aug2.0_464.1_14178.t2 MALKPVLKNKVDELFLRWLSEADTQVTLKENLRQLANGENLSQPSPYLSVTSSRGSGKHSPRVRPGSPPSAPTNKLPSPR SPRRPLTNKSNHKTVNGSSKRPYAEVRYVCSRVTIHHNSRVELKWKRSLHHCAQCDVGGTYRGWGISCGAIHYGRCTPVT FPFPQNYNVNRRKGNGQGVIPVAKVIPTRSVRAQPEEVSVVDGGQEKPYDTNKKSTLSVPNSNKDGREIIPKDSSSNDII SSQKDKGKENKELSPSSTTATPTVTTITISDKKDKTKKPDINKYRNVNSASIPKFYFPYGRPATGEQTDSLMKNALEEIA KLPDGKVYKHQMGNIVKACNLPLYWKALLFHASGGDKQGYITQQSFTAMWKRIFHSCHDEAARFVKLSTKPGCSHLTEDD FLPLVQDVVDTHPGLTFLREAPEFHSRYVNTVIARIFYNVNRSWNGKITITELRKSNFLQTLALLEQEDDINVIVDFFSY EHFYVIYCKFWELDKDHDLYIDKADLARHNDHAMSMRVIDRIFSGSVMRGKSLTEGKMSYPEFVWFLISEEDKKHPTSVE YWFRCMDIDGDGVISMYEMEFFYEEQMQKMESMGIEKLPFEDCLCQMLDLVRPREEGKITLADLKNCKMTNIFFDTFLNL DKFLEHEQRDPFSNIRRIFERNCHLKEGDGLFFESCDSPSSPQLRHYEDDFEPEDDEVNQEEEKSNRSTKRTDSPALRTQ TNMKLGGKDDDIYDFSSENLGY |
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