Gene
| Gene Model ID | pfu_aug2.0_464.1_14183 |
|---|---|
| Locus | scaffold464.1 : 109911 ... 129695 : - |
| To GenomeBrowser | scaffold464.1:109911..129695 |
| Genes list of scaffold | scaffold464.1 |
| Synonym | pfu_aug1.0_63997.1_20352 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_464.1_14183.t1 | 1 | 1 | SPRY | 56 | 154 | 4.3e-10 | 39.7 | 5.1e-14 | 7.6e-10 | 38.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_464.1_14183.t1 | gi|260796617|ref|XP_002593301.1| | hypothetical protein BRAFLDRAFT_123644 [Branchiostoma floridae] | 3.0e-27 |
| pfu_aug2.0_464.1_14183.t1 | gi|697436278|ref|XP_009685894.1| | PREDICTED: SPRY domain-containing protein 3 [Struthio camelus australis] | 1.0e-26 |
| pfu_aug2.0_464.1_14183.t1 | gi|90075254|dbj|BAE87307.1| | unnamed protein product [Macaca fascicularis] | 2.0e-26 |
| pfu_aug2.0_464.1_14183.t1 | gi|568992277|ref|XP_006520949.1| | PREDICTED: SPRY domain-containing protein 3 isoform X1 [Mus musculus] | 4.0e-26 |
| pfu_aug2.0_464.1_14183.t1 | gi|505774321|ref|XP_004601895.1| | PREDICTED: SPRY domain-containing protein 3 [Sorex araneus] | 6.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_464.1_14183.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_464.1_14183.t1 atggcttacagaatagcaagaaaggcattacctttccgatcacaaagaacatcaagatgtagacatgaaaacgttaaaat ggacggtcaaataatcagttaccaaccaggcaagggggatgatcgtgttggttcatacattgctgaggaccctcttactc cacaaaattactactttgaagtaaaaatccttgacattggaacaaatggtacaattggagttgggttggtgtcatccaat tatccgatgtacaatcaacctggatggaaagaattatccgtgggcttccatgcagatgatggacacttatatctttctgc tggttatggcgacgaattcggtccgacatccactactggggatacgataggctgtggcatagaatttccaacagatgccg acaaatatgaaatcttaattcttcagcatgttgaagtcttttttactcataatggaaagaaggcattacctccccgagac aaaaggacatcaagatgtagatatgaaaacgtaagagtgaacggtgaagttatcagaatatttcagttacttgtatttca tgcttacgtcttcaaattcattagcattattttagagcagataaatttacagcatggaccagacatgcacgtttcgggtg atgaaagatgtgatcacatcgtacagaagttcatttggaatgatcacattgtgattccagttcagaccacaaatacaggg aagaaattactacctcctaaagtgttccagtga |
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Protein
| Protein ID | pfu_aug2.0_464.1_14183.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_464.1_14183.t1 MAYRIARKALPFRSQRTSRCRHENVKMDGQIISYQPGKGDDRVGSYIAEDPLTPQNYYFEVKILDIGTNGTIGVGLVSSN YPMYNQPGWKELSVGFHADDGHLYLSAGYGDEFGPTSTTGDTIGCGIEFPTDADKYEILILQHVEVFFTHNGKKALPPRD KRTSRCRYENVRVNGEVIRIFQLLVFHAYVFKFISIILEQINLQHGPDMHVSGDERCDHIVQKFIWNDHIVIPVQTTNTG KKLLPPKVFQ |
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