Gene
| Gene Model ID | pfu_aug2.0_464.1_14189 |
|---|---|
| Locus | scaffold464.1 : 203405 ... 209894 : - |
| To GenomeBrowser | scaffold464.1:203405..209894 |
| Genes list of scaffold | scaffold464.1 |
| Synonym | pfu_aug1.0_13408.1_53944 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| acetylcholine receptor protein subunit alpha-l1 | GO:0005216 GO:0006811 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_464.1_14189.t1 | 3 | 1 | Neur_chan_LBD | 33 | 124 | 9.6e-37 | 126.2 | 2.5e-32 | 1.8e-28 | 99.1 |
| pfu_aug2.0_464.1_14189.t1 | 3 | 2 | Neur_chan_LBD | 124 | 191 | 9.6e-37 | 126.2 | 2.8e-12 | 2.1e-08 | 33.6 |
| pfu_aug2.0_464.1_14189.t1 | 1 | 1 | Neur_chan_memb | 198 | 476 | 1.00053e-42 | 146.6 | 0.0 | 1.49939e-42 | 146.1 |
| pfu_aug2.0_464.1_14189.t1 | 3 | 3 | Neur_chan_LBD | 376 | 421 | 9.6e-37 | 126.2 | 0.15 | 1100.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_464.1_14189.t1 | gi|676485279|ref|XP_009063610.1| | hypothetical protein LOTGIDRAFT_210710 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_464.1_14189.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_464.1_14189.t1 atggcaccggacgccttaacatggcaggtggtggtactttatctgtgtatgtggttctttctttttgaagttatacattg tacgtccgtgccagatgaacaaagactgtaccaggacctgatgttaggatacgagaagtcagttcgtcctgtaatcaact cgtccacaatattacaagtcactctcggtttgaagctgaatcaaattgtagatttggatgagagacaccaagtactcaca accaacgtttttattgatcaggaatggcgagacgagaatttattatggaatcctatagagtataataatataagatctct gaggatccccgccaaacaagtatggctgccggacacattcatctacaacaaattcggttcgtggatatacagcggtctgt ggatggactatcaatctctgaacaacgatacaccggtagatctgacgtcatatgttaataatagcgagtgggatttactg tcagtgtcactaaagagaaacgtcagaaaacattcgtgctgcgacgacccgcatccggatatgacgtatgttttccacat ccgccggaagacgttctactacatcttcaacatcatagtcccgtgtgtgatgctttcagttctgactttattgacgtttt ggttaccgcctacctctggcgagaaaatcactctgggtctatctgtgtttctagcattttcaatgtttatgttgctgata gcagaggaagtacccgcgacgtcagaagctgttcctttgataggaatatatttgtgtgtcgtcatgacgatgacgtcatt gtccgttattatggctgtcatggtgattaacctgtataacagaggactgaaaacgaggcgggcacctgcttggctacggg cgataactctacgttggatttcaaaacctctccttatgaaacacgacattgaaaaagtagcaaatacgatatctctggaa gatgaaaaagaaggtgcctatcgatgtaaaaagcatgacaaaaaacagaaattaaacaatcttcatgaagtcaacactaa tgacgaatacagacctactgtccgtaatagacgttttacaaacaattcaatagacaaaccaatcaaaactaacgattcag aagaagaagaagtgatatggttgcgtagagaggatttcgtgccagaaacaagtgaaatcgatgccgatgttaccatggca tccaataattttaatttaaaagaatctcaaaataataataaagttaaacaaacttgtactcattccgaaaatcgtgattc caaaacgtgtgcagagcaaatagagaaggaaatatctgaagtttgtaaaactcaaataaatcttaaaaataggaaattga tagtggccgagtggcagaggatagccgctgtagtagatagaatattgttctggttttatttccttggtactctggcctcg tacattctgatactagtggtggtacccgacgaacaatatgaaatgtggaacaaacaaattagggaatatagaatcaacaa acaagatccatacgtaagttag |
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Protein
| Protein ID | pfu_aug2.0_464.1_14189.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_464.1_14189.t1 MAPDALTWQVVVLYLCMWFFLFEVIHCTSVPDEQRLYQDLMLGYEKSVRPVINSSTILQVTLGLKLNQIVDLDERHQVLT TNVFIDQEWRDENLLWNPIEYNNIRSLRIPAKQVWLPDTFIYNKFGSWIYSGLWMDYQSLNNDTPVDLTSYVNNSEWDLL SVSLKRNVRKHSCCDDPHPDMTYVFHIRRKTFYYIFNIIVPCVMLSVLTLLTFWLPPTSGEKITLGLSVFLAFSMFMLLI AEEVPATSEAVPLIGIYLCVVMTMTSLSVIMAVMVINLYNRGLKTRRAPAWLRAITLRWISKPLLMKHDIEKVANTISLE DEKEGAYRCKKHDKKQKLNNLHEVNTNDEYRPTVRNRRFTNNSIDKPIKTNDSEEEEVIWLRREDFVPETSEIDADVTMA SNNFNLKESQNNNKVKQTCTHSENRDSKTCAEQIEKEISEVCKTQINLKNRKLIVAEWQRIAAVVDRILFWFYFLGTLAS YILILVVVPDEQYEMWNKQIREYRINKQDPYVS |
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