Gene
| Gene Model ID | pfu_aug2.0_469.1_30798 |
|---|---|
| Locus | scaffold469.1 : 4864 ... 11905 : - |
| To GenomeBrowser | scaffold469.1:4864..11905 |
| Genes list of scaffold | scaffold469.1 |
| Synonym | pfu_aug1.0_257481.1_21596 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_469.1_30798.t2 | 1 | 1 | Cadherin | 2 | 79 | 4.1e-09 | 36.5 | 2.4e-12 | 8.8e-09 | 35.5 |
Transcript
| Transcript ID | pfu_aug2.0_469.1_30798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_469.1_30798.t1 atgtctgtttacgccaccgatattgacgccgctcagaacggagaggtcagatattctaaggttgacagtaacaattctcc attcagcgtaaacaatattgatggagaaatcaccactaacagtgaattcttcaaggactcaaattacgtctctcaatacc gctttacagtacaggcaacagaccaagctcctctcaatactagagaatcaaggaatacccagatatatattaaccttatc gaagacatcaaccgctttattctgcaatacaatgtaccaccagaaacatctctcgccaatttggaaaacatacgacagaa attacaaaatggtacaaacaagattgtcctcattgaaaaagtgaccgcaagacgtgatttgttaaatggacaactcaact atgatgaaagatattcagatatcacattcgttatcagcgatcagaacagaggttatcaactggctgaaaatacagattca tcactcagcatacttggggatgctggaacagcagccggtagtctcggtcaaatctacgtagacttgaacagaaatgtcga cgatgtaaggaaaccatacgaagccgctaatattcaaggtataaacagtgctttagcagctaacagaaacatcgttcgtg tcatgaccaaatcctacatatggtggatggatgatccatgggcagctctcgtggctttggccgctatcatcgtcttactc agcattgtaggaatcatcattctggcagtatcctggtcaagatataacaactacctagccagctacagagtataccgtag aaactatgagcaccaacctgacttcacaaatccaccaagcttccttaaagagtatgagactcagagtatgaacatgtacg tacctccagatgagacagtaggagacgttggcatgatcggaattggatttgatccggaggcgtcggcacgcgctagtacc ggttccaaagtagtggcaaggagaaaccctgcttacgacaacagagagcaggtcattgatgtagccattttgaattag |
|
| Transcript ID | pfu_aug2.0_469.1_30798.t2 |
| Definition | - |
>pfu_aug2.0_469.1_30798.t2 atgtctgtttacgccaccgatattgacgccgctcagaacggagaggtcagatattctaaggttgacagtaacaattctcc attcagcgtaaacaatattgatggagaaatcaccactaacagtgaattcttcaaggactcaaattacgtctctcaatacc gctttacagtacaggcaacagaccaagctcctctcaatactagagaatcaaggaatacccagatatatattaaccttatc gaagacatcaaccgctttattctgcaatacaatgtaccaccagaaacatctctcgccaatttggaaaacatacgacagaa attacaaaatggtacaaacaagattgtcctcattgaaaaagtgaccgcaagacgtgatttgttaaatggacaactcaact atgatgaaagatattcagatatcacattcgttatcagcgatcagaacagaggttatcaactggctgaaaatacagattca tcactcagcatacttggggatgctggaacagcagccggtagtctcggtcaaatctacgtagacttgaacagaaatgtcga cgatgtaaggaaaccatacgaagccgctaatattcaaggtataaacagtgctttagcagctaacagaaacatcgttcgtg tcatgaccaaatcctacatatggtggatggatgatccatgggcagctctcgtggctttggccgctatcatcgtcttactc agcattgtaggaatcatcattctggcagtatcctggtcaagatataacaactacctagccagctacagagtataccgtag aaactatgagcaccaacctgacttcacaaatccaccaagcttccttaaagagtatgagactcagagtatgaacatgtacg tacctccagatgagacagtaggagacgttggcatgatcggaattggatttgatccggaggcgtcggcacgcgctagtacc ggttccaaagtagtggcaaggagaaaccctgcttacgacaacagagagcaaatcccaactatagttgatggcatctggaa taatattatacataggcaaacccatttggtcattgatgtagccattttgaattag |
|
Protein
| Protein ID | pfu_aug2.0_469.1_30798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_469.1_30798.t1 MSVYATDIDAAQNGEVRYSKVDSNNSPFSVNNIDGEITTNSEFFKDSNYVSQYRFTVQATDQAPLNTRESRNTQIYINLI EDINRFILQYNVPPETSLANLENIRQKLQNGTNKIVLIEKVTARRDLLNGQLNYDERYSDITFVISDQNRGYQLAENTDS SLSILGDAGTAAGSLGQIYVDLNRNVDDVRKPYEAANIQGINSALAANRNIVRVMTKSYIWWMDDPWAALVALAAIIVLL SIVGIIILAVSWSRYNNYLASYRVYRRNYEHQPDFTNPPSFLKEYETQSMNMYVPPDETVGDVGMIGIGFDPEASARAST GSKVVARRNPAYDNREQVIDVAILN |
|
| Protein ID | pfu_aug2.0_469.1_30798.t2 |
| Definition | - |
>pfu_aug2.0_469.1_30798.t2 MSVYATDIDAAQNGEVRYSKVDSNNSPFSVNNIDGEITTNSEFFKDSNYVSQYRFTVQATDQAPLNTRESRNTQIYINLI EDINRFILQYNVPPETSLANLENIRQKLQNGTNKIVLIEKVTARRDLLNGQLNYDERYSDITFVISDQNRGYQLAENTDS SLSILGDAGTAAGSLGQIYVDLNRNVDDVRKPYEAANIQGINSALAANRNIVRVMTKSYIWWMDDPWAALVALAAIIVLL SIVGIIILAVSWSRYNNYLASYRVYRRNYEHQPDFTNPPSFLKEYETQSMNMYVPPDETVGDVGMIGIGFDPEASARAST GSKVVARRNPAYDNREQIPTIVDGIWNNIIHRQTHLVIDVAILN |
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