Gene
| Gene Model ID | pfu_aug2.0_469.1_30800 |
|---|---|
| Locus | scaffold469.1 : 187800 ... 195830 : + |
| To GenomeBrowser | scaffold469.1:187800..195830 |
| Genes list of scaffold | scaffold469.1 |
| Synonym | pfu_aug1.0_29632.1_55311 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_469.1_30800.t1 | 1 | 1 | DERM | 6 | 155 | 9.0e-38 | 129.6 | 1.40004e-41 | 1.0e-37 | 129.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_469.1_30800.t1 | gi|301624748|ref|XP_002941651.1| | PREDICTED: hemagglutinin/amebocyte aggregation factor-like isoform X1 [Xenopus (Silurana) tropicalis] | 2.0e-28 |
| pfu_aug2.0_469.1_30800.t1 | gi|163914479|ref|NP_001106323.1| | uncharacterized protein LOC100127280 precursor [Xenopus laevis] | 4.0e-28 |
| pfu_aug2.0_469.1_30800.t1 | gi|213511935|ref|NP_001134776.1| | Hemagglutinin/amebocyte aggregation factor [Salmo salar] | 9.0e-28 |
| pfu_aug2.0_469.1_30800.t1 | gi|512826386|ref|XP_002941662.2| | 2.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_469.1_30800.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_469.1_30800.t1 atgacacactggattaatggttacgaccgaccggttaatttccaatgtccggatagctacaccatctcgtattggagatc agtacatgataatcgtttcgaggacagattgtttgatttgagctgcgaatttctggaacagacgactgccctgactccaa tctgttcctggacaggctatgtgaacacgtgggaccaaacaatcaatttctactgctcaaataatggctacatcaatgga tttcacagtgtccaccataattattatgaggatcgcagaatgagcttccgatgttgttatctcccagatatatgtgcagt gaattgtagaggaacaggctgggtcaatgactacgatcgtgaagttcgccatattgttccaatagcagagattctgcatg gcattaagagtcaacataatgatgctacagaagatcgtatttggggattcactaactgctactatcaaagatgtaacttt tag |
|
Protein
| Protein ID | pfu_aug2.0_469.1_30800.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_469.1_30800.t1 MTHWINGYDRPVNFQCPDSYTISYWRSVHDNRFEDRLFDLSCEFLEQTTALTPICSWTGYVNTWDQTINFYCSNNGYING FHSVHHNYYEDRRMSFRCCYLPDICAVNCRGTGWVNDYDREVRHIVPIAEILHGIKSQHNDATEDRIWGFTNCYYQRCNF |
|