Gene
| Gene Model ID | pfu_aug2.0_469.1_30802 |
|---|---|
| Locus | scaffold469.1 : 207820 ... 232406 : + |
| To GenomeBrowser | scaffold469.1:207820..232406 |
| Genes list of scaffold | scaffold469.1 |
| Synonym | pfu_aug1.0_8519.1_38771 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_469.1_30802.t2 | 1 | 1 | CH | 6 | 107 | 1.2e-19 | 70.3 | 7.3e-23 | 2.7e-19 | 69.1 |
| pfu_aug2.0_469.1_30802.t2 | 1 | 1 | CAMSAP_CH | 22 | 85 | 6.7e-10 | 38.4 | 3.9e-13 | 1.5e-09 | 37.4 |
| pfu_aug2.0_469.1_30802.t2 | 1 | 1 | DUF3585 | 917 | 1054 | 8.7e-37 | 126.1 | 8.9e-40 | 3.3e-36 | 124.2 |
Transcript
| Transcript ID | pfu_aug2.0_469.1_30802.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_469.1_30802.t1 atggcaactaaggtcaaggctctacagatgtggtgtaagaagatggcggacggttaccgggacgtagaggtcagggacat gacctcgtcctggaaggacggccttgctttctgtgccatcatccatcgtcatcgtccagacttgatagattatgatgccc tctccaaagagaatatttttgataacaatcagctggcgtttgaggtagcagagaaggagttaggaataccggccctactt gacgctccagacatggtggccatcagggtcccagacaaactcagcgtggttacatacgtatcacagtattacaattactt ctgtaataaaccacagctgggtggtcctggagtgaagaagccaaatacactgaagagaacccaggctacaccaacgggac ctgatgctaaacgacagtcccttggacctaatgatgggaccccgaacaaggacagacaagtttcaatgggagacaaatgt gccatatgtcataagaaggtataccttttagaacgtcacgtaaatgaaggacagctctatcataggacttgtttcaggag tagtgataattcccctcaaagaaaaatcaataaacgtttagatgccatgggcgaccgagaaagtgatgagaagaaatcat tgcaggataaaaaaggtgaagaaccaaatttctggaagagaagagctgatgctaaaaagactgagagcaaatcaaacgga cacgtaaacagtgacgctgataaaggacaagtgcctaacaaaaaacatgacagtagtggagtcttaagttcccttgtgca taatttgaaagggagtgattctaaatctaagcaaccctcacaacataatgctcctacagaaacaagtgacaaaacaaaag ataatgtgacatcacggcctgcagatctgaaactagattctcatagtgttgatattaagaataataaaaaccttgattct gttggtgggactaccaagagtgaacctgatgtgaaagtgaatgttgtccctcctcgaccgagggcaagacatgtagctaa aattggtgcttataaagaaaaacgtgaagaagaacctatggatacttcacattcttcagatgatatacaaactaaaagac agagtactgggaatgtcctagatagaacaaagccgacaaataaaacagaagggaagaaggaagaacagaaaagtgtggta gctccgccaagagcaagacatgttgttaaaatcactgctaaaaaggaggagtctgatgttcgtgagcgatcaaaatctcc gttacaatcaaagcctgttcctagtgcacggacacctgagagtctttcaaaaactggtgctaagaatgacgaggattcaa gtgcaaataaacattcaatgtcccctatgtataagtcatctactactacaaaaacaccagagagcccccctcccttgcca tcctctctcccacctactgtaaaaccttcaacaccctcatccccaccccctcttccttcaaatttgcctcctcagcttaa atcatctcctctctcacccatcagtctgccctcatcaaggggtaaatcacctcccagaacagattcatcccattcaaaca aaaattctcaaatacatgaactaaactcaaaagaatctccaaaggcaaaaccaagacatgcaaaaacagctgttgaaagt aaagcaaaagagaaaaatgattctgcatcttcaattgtcagtccaacaaaacaagatcaagaattgttaggtggactatt gaaaaatttggctgacattcgacaaagaaagtcttcatcagaatcaaatgataaatcaccattgtctcctactcagggcc tgagttcaaaactgcaaaacattcaagaaagtaaagaaggtagaagggatattaaaagcttagacattgatgctgaaaag aaaaaagatagagcaggaaaagctaaatcagacttcttgtctggaaaattatccgttttctctagcgaatctgaaagtgt cagtgatagacctaagactgagaaaaaagttaagtcagatttcaattcaaatgaggatgatgatattcctgcatggaaaa aagcattagaagaaagaaagaagaaaaacttaagaccaaagtcagaggctgtattgaatgaagaatctcaagtaaatgag ccggcatggaaaagtggtctgaataaaaagaatgcaaacagaccaaaatcaatggatatattgtctgagattgacaaaga gaaagatcaaaagccagcatggcagcttgaagcagaaaagcgaatggctgccaacgaaaaaaaatttgttgatccagaga aaaaccgaatagatcaaggtgtaaagaaaaatgagaaaacagataacagcaaaccgagaccttatactgcatatggggaa cttgagagcaaaagtaaatcaccagtgtctggaaaggtaactgacaatagtgaaagcaaggtaaagagcagaattcttcc aactgctcctagtgacagtaaacaatcagagaccgaaaaaaagaaaatttctgtggacactaaatttagttttaacttga atttcaaagacaaagaaaaggaaaaggaccctggtaaaccacccagaccaccaactagccctgctgcactgaaatcaaag ataggaacagcagaagatgacaggtcttccatacactccccgcccctcaggcccccggcacccaggtcaacagaggtcaa gacattcggggatgtaaagagactcactcccagagaaattcagaagcagttatcagaaattgaccatcgcctgactgacc tagagataaggggaagaactctggaggattccatcagaaaagctcaagaggaagaagaagatgaggtgatgatggtggaa tggttcaagctggttaacgagaaaaacgatttagttcgccaggaagccgatctaatttacagatctcgagcacaagagtt agaggatgaacaacatgacatagatatgaagttaagacacttgattaaaaagccagagttcatgaggacagaagaggata aaaaagaggaggagtacttactgaacaagctagtagagattgtgaaccagaggagtctgatagtagacagtcaagatgag gatcgtatcaggtatgaagaggaggacagagagattgcagaaatactggcatcaaaagtaaggtcaagtaaattgaggtc atcctgcttccaattccttcggcgtctcttcaagattcaaggactgtttctgtaa |
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| Transcript ID | pfu_aug2.0_469.1_30802.t2 |
| Definition | - |
>pfu_aug2.0_469.1_30802.t2 atggcaactaaggtcaaggctctacagatgtggtgtaagaagatggcggacggttaccgggacgtagaggtcagggacat gacctcgtcctggaaggacggccttgctttctgtgccatcatccatcgtcatcgtccagacttgatagattatgatgccc tctccaaagagaatatttttgataacaatcagctggcgtttgaggtagcagagaaggagttaggaataccggccctactt gacgctccagacatggtggccatcagggtcccagacaaactcagcgtggttacatacgtatcacagtattacaattactt ctgtaataaaccacagctgggtggtcctggagtgaagaagccaaatacactgaagagaacccaggctacaccaacgggac ctgatgctaaacgacagtcccttggacctaatgatgggaccccgaacaaggacagacaagtttcaatgggagacaaatgt gccatatgtcataagaaggtataccttttagaacgtcacgtaaatgaaggacagctctatcataggacttgtttcaggag tagtgataattcccctcaaagaaaaatcaataaacgtttagatgccatgggcgaccgagaaagtgatgagaagaaatcat tgcaggataaaaaaggtgaagaaccaaatttctggaagagaagagctgatgctaaaaagactgagagcaaatcaaacgga cacgtaaacagtgacgctgataaaggacaagtgcctaacaaaaaacatgacagtagtggagtcttaagttcccttgtgca taatttgaaagggagtgattctaaatctaagcaaccctcacaacataatgctcctacagaaacaagtgacaaaacaaaag ataatgtgacatcacggcctgcagatctgaaactagattctcatagtgttgatattaagaataataaaaaccttgattct gttggtgggactaccaagagtgaacctgatgtgaaagtgaatgttgtccctcctcgaccgagggcaagacatgtagctaa aattggtgcttataaagaaaaacgtgaagaagaacctatggatacttcacattcttcagatgatatacaaactaaaagac agagtactgggaatgtcctagatagaacaaagccgacaaataaaacagaagggaagaaggaagaacagaaaagtgtggta gctccgccaagagcaagacatgttgttaaaatcactgctaaaaaggaggagtctgatgttcgtgagcgatcaaaatctcc gttacaatcaaagcctgttcctagtgcacggacacctgagagtctttcaaaaactggtgctaagaatgacgaggattcaa gtgcaaataaacattcaatgtcccctatgtataagtcatctactactacaaaaacaccagagagcccccctcccttgcca tcctctctcccacctactgtaaaaccttcaacaccctcatccccaccccctcttccttcaaatttgcctcctcagcttaa atcatctcctctctcacccatcagtctgccctcatcaaggggtaaatcacctcccagaacagattcatcccattcaaaca aaaattctcaaatacatgaactaaactcaaaagaatctccaaaggcaaaaccaagacatgcaaaaacagctgttgaaagt aaagcaaaagagaaaaatgattctgcatcttcaattgtcagtccaacaaaacaagatcaagaattgttaggtggactatt gaaaaatttggctgacattcgacaaagaaagtcttcatcagaatcaaatgataaatcaccattgtctcctactcagggcc tgagttcaaaactgcaaaacattcaagaaagtaaagaaggtagaagggatattaaaagcttagacattgatgctgaaaag aaaaaagatagagcaggaaaagctaaatcagacttcttgtctggaaaattatccgttttctctagcgaatctgaaagtgt cagtgatagacctaagactgagaaaaaagttaagtcagatttcaattcaaatgaggatgatgatattcctgcatggaaaa aagcattagaagaaagaaagaagaaaaacttaagaccaaagtcagaggctgtattgaatgaagaatctcaagtaaatgag ccggcatggaaaagtggtctgaataaaaagaatgcaaacagaccaaaatcaatggatatattgtctgagattgacaaaga gaaagatcaaaagccagcatggcagcttgaagcagaaaagcgaatggctgccaacgaaaaaaaatttgttgatccagaga aaaaccgaatagatcaaggtgtaaagaaaaatgagaaaacagataacagcaaaccgagaccttatactgcatatggggaa cttgagagcaaaagtaaatcaccagtgtctggaaaggtaactgacaatagtgaaagcaaggtaaagagcagaattcttcc aactgctcctagtgacagtaaacaatcagagaccgaaaaaaagaaaatttctgtggacactaaatttagttttaacttga atttcaaagacaaagaaaaggaaaaggaccctggtaaaccacccagaccaccaactagccctgctgcactgaaatcaaag ataggaacagcagaagatgacaggtcttccatacactccccgcccctcaggcccccggcacccaggtcaacagaggtcaa gacattcggggatgtaaagagactcactcccagagaaattcagaagcagttatcagaaattgaccatcgcctgactgacc tagagataaggggaagaactctggaggattccatcagaaaagctcaagaggaagaagaagatgaggtgatgatggtggaa tggttcaagctggttaacgagaaaaacgatttagttcgccaggaagccgatctaatttacagatctcgagcacaagagtt agaggatgaacaacatgacatagatatgaagttaagacacttgattaaaaagccagagttcatgaggacagaagaggata aaaaagaggaggagtacttactgaacaagctagtagagattgtgaaccagaggagtctgatagtagacagtcaagatgag gatcgtatcaggtatgaagaggaggacagagagattgcagaaatactggcatcaaaaggtttctgtaaggagcctaaatc agccaagaaagagggaaaacatgagaagaagaagaaaaaggagaaaaagaaggacaaagcagaaaaagctgcttaa |
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Protein
| Protein ID | pfu_aug2.0_469.1_30802.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_469.1_30802.t1 MATKVKALQMWCKKMADGYRDVEVRDMTSSWKDGLAFCAIIHRHRPDLIDYDALSKENIFDNNQLAFEVAEKELGIPALL DAPDMVAIRVPDKLSVVTYVSQYYNYFCNKPQLGGPGVKKPNTLKRTQATPTGPDAKRQSLGPNDGTPNKDRQVSMGDKC AICHKKVYLLERHVNEGQLYHRTCFRSSDNSPQRKINKRLDAMGDRESDEKKSLQDKKGEEPNFWKRRADAKKTESKSNG HVNSDADKGQVPNKKHDSSGVLSSLVHNLKGSDSKSKQPSQHNAPTETSDKTKDNVTSRPADLKLDSHSVDIKNNKNLDS VGGTTKSEPDVKVNVVPPRPRARHVAKIGAYKEKREEEPMDTSHSSDDIQTKRQSTGNVLDRTKPTNKTEGKKEEQKSVV APPRARHVVKITAKKEESDVRERSKSPLQSKPVPSARTPESLSKTGAKNDEDSSANKHSMSPMYKSSTTTKTPESPPPLP SSLPPTVKPSTPSSPPPLPSNLPPQLKSSPLSPISLPSSRGKSPPRTDSSHSNKNSQIHELNSKESPKAKPRHAKTAVES KAKEKNDSASSIVSPTKQDQELLGGLLKNLADIRQRKSSSESNDKSPLSPTQGLSSKLQNIQESKEGRRDIKSLDIDAEK KKDRAGKAKSDFLSGKLSVFSSESESVSDRPKTEKKVKSDFNSNEDDDIPAWKKALEERKKKNLRPKSEAVLNEESQVNE PAWKSGLNKKNANRPKSMDILSEIDKEKDQKPAWQLEAEKRMAANEKKFVDPEKNRIDQGVKKNEKTDNSKPRPYTAYGE LESKSKSPVSGKVTDNSESKVKSRILPTAPSDSKQSETEKKKISVDTKFSFNLNFKDKEKEKDPGKPPRPPTSPAALKSK IGTAEDDRSSIHSPPLRPPAPRSTEVKTFGDVKRLTPREIQKQLSEIDHRLTDLEIRGRTLEDSIRKAQEEEEDEVMMVE WFKLVNEKNDLVRQEADLIYRSRAQELEDEQHDIDMKLRHLIKKPEFMRTEEDKKEEEYLLNKLVEIVNQRSLIVDSQDE DRIRYEEEDREIAEILASKVRSSKLRSSCFQFLRRLFKIQGLFL |
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| Protein ID | pfu_aug2.0_469.1_30802.t2 |
| Definition | - |
>pfu_aug2.0_469.1_30802.t2 MATKVKALQMWCKKMADGYRDVEVRDMTSSWKDGLAFCAIIHRHRPDLIDYDALSKENIFDNNQLAFEVAEKELGIPALL DAPDMVAIRVPDKLSVVTYVSQYYNYFCNKPQLGGPGVKKPNTLKRTQATPTGPDAKRQSLGPNDGTPNKDRQVSMGDKC AICHKKVYLLERHVNEGQLYHRTCFRSSDNSPQRKINKRLDAMGDRESDEKKSLQDKKGEEPNFWKRRADAKKTESKSNG HVNSDADKGQVPNKKHDSSGVLSSLVHNLKGSDSKSKQPSQHNAPTETSDKTKDNVTSRPADLKLDSHSVDIKNNKNLDS VGGTTKSEPDVKVNVVPPRPRARHVAKIGAYKEKREEEPMDTSHSSDDIQTKRQSTGNVLDRTKPTNKTEGKKEEQKSVV APPRARHVVKITAKKEESDVRERSKSPLQSKPVPSARTPESLSKTGAKNDEDSSANKHSMSPMYKSSTTTKTPESPPPLP SSLPPTVKPSTPSSPPPLPSNLPPQLKSSPLSPISLPSSRGKSPPRTDSSHSNKNSQIHELNSKESPKAKPRHAKTAVES KAKEKNDSASSIVSPTKQDQELLGGLLKNLADIRQRKSSSESNDKSPLSPTQGLSSKLQNIQESKEGRRDIKSLDIDAEK KKDRAGKAKSDFLSGKLSVFSSESESVSDRPKTEKKVKSDFNSNEDDDIPAWKKALEERKKKNLRPKSEAVLNEESQVNE PAWKSGLNKKNANRPKSMDILSEIDKEKDQKPAWQLEAEKRMAANEKKFVDPEKNRIDQGVKKNEKTDNSKPRPYTAYGE LESKSKSPVSGKVTDNSESKVKSRILPTAPSDSKQSETEKKKISVDTKFSFNLNFKDKEKEKDPGKPPRPPTSPAALKSK IGTAEDDRSSIHSPPLRPPAPRSTEVKTFGDVKRLTPREIQKQLSEIDHRLTDLEIRGRTLEDSIRKAQEEEEDEVMMVE WFKLVNEKNDLVRQEADLIYRSRAQELEDEQHDIDMKLRHLIKKPEFMRTEEDKKEEEYLLNKLVEIVNQRSLIVDSQDE DRIRYEEEDREIAEILASKGFCKEPKSAKKEGKHEKKKKKEKKKDKAEKAA |
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