Gene
| Gene Model ID | pfu_aug2.0_469.1_30806 |
|---|---|
| Locus | scaffold469.1 : 294100 ... 297558 : + |
| To GenomeBrowser | scaffold469.1:294100..297558 |
| Genes list of scaffold | scaffold469.1 |
| Synonym | pfu_aug1.0_8071.1_17236 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_469.1_30806.t1 | 2 | 1 | Ank_4 | 11 | 62 | 1.1e-09 | 38.5 | 6.4e-10 | 1.9e-06 | 28.2 |
| pfu_aug2.0_469.1_30806.t1 | 1 | 1 | Ank_2 | 13 | 70 | 1.5e-11 | 44.4 | 7.6e-15 | 2.3e-11 | 43.8 |
| pfu_aug2.0_469.1_30806.t1 | 2 | 1 | Ank_3 | 13 | 35 | 4.6e-08 | 32.5 | 0.0012 | 3.5 | 8.1 |
| pfu_aug2.0_469.1_30806.t1 | 3 | 1 | Ank | 14 | 38 | 1.7e-11 | 43.3 | 0.0016 | 4.7 | 7.2 |
| pfu_aug2.0_469.1_30806.t1 | 3 | 1 | Ank_5 | 14 | 46 | 2.1e-09 | 37.3 | 0.00026 | 0.76 | 10.1 |
| pfu_aug2.0_469.1_30806.t1 | 3 | 2 | Ank_5 | 39 | 79 | 2.1e-09 | 37.3 | 4.2e-11 | 1.2e-07 | 31.6 |
| pfu_aug2.0_469.1_30806.t1 | 3 | 2 | Ank | 41 | 72 | 1.7e-11 | 43.3 | 9.7e-12 | 2.9e-08 | 33.1 |
| pfu_aug2.0_469.1_30806.t1 | 2 | 2 | Ank_3 | 41 | 68 | 4.6e-08 | 32.5 | 4.0e-08 | 0.00012 | 21.9 |
| pfu_aug2.0_469.1_30806.t1 | 2 | 2 | Ank_4 | 43 | 79 | 1.1e-09 | 38.5 | 9.5e-06 | 0.028 | 14.9 |
| pfu_aug2.0_469.1_30806.t1 | 3 | 3 | Ank | 74 | 83 | 1.7e-11 | 43.3 | 0.78 | 2300.0 | -1.3 |
| pfu_aug2.0_469.1_30806.t1 | 3 | 3 | Ank_5 | 143 | 157 | 2.1e-09 | 37.3 | 2.4 | 7100.0 | -2.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_469.1_30806.t1 | gi|524871398|ref|XP_005092472.1| | PREDICTED: ankyrin repeat domain-containing protein 40-like [Aplysia californica] | 2.0e-37 |
| pfu_aug2.0_469.1_30806.t1 | gi|557268980|ref|XP_006019820.1| | PREDICTED: ankyrin repeat domain-containing protein 40 [Alligator sinensis] | 3.0e-34 |
| pfu_aug2.0_469.1_30806.t1 | gi|564228491|ref|XP_006258695.1| | PREDICTED: ankyrin repeat domain-containing protein 40 [Alligator mississippiensis] | 3.0e-34 |
| pfu_aug2.0_469.1_30806.t1 | gi|348562179|ref|XP_003466888.1| | PREDICTED: ankyrin repeat domain-containing protein 40 [Cavia porcellus] | 6.0e-34 |
| pfu_aug2.0_469.1_30806.t1 | gi|512996416|ref|XP_004859796.1| | PREDICTED: ankyrin repeat domain-containing protein 40 [Heterocephalus glaber] | 1.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_469.1_30806.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_469.1_30806.t1 atgaacgagcatcaagatttagaggaaaaacttcgtgaggcagcatctgtaggggacatagagtctgtaaaagttctggt ggaagcaaaacacgttgatgtgaattcaaagaatgcagtaaatcaatggacagctttacattgggcctcaaaaagaaacc aaagtgcaatagtatcatacctcctcctacatggagctgataaaagtctccccaataaagacggtgactcacctgtaatg ctgacaagtagtacagaaatcagaaatatgttgggtggctcaggtcagacagaaacaaggcaatcagagttacctatcac accaaactatttggcaaatccacctttcccctatacccagccagttgtcacaaataatcctactagtatgattgatcagt ccaggagagaaacaccagcagccaatggttctaacagagaggaagacggtaaatctcttcactatgactattaa |
|
Protein
| Protein ID | pfu_aug2.0_469.1_30806.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_469.1_30806.t1 MNEHQDLEEKLREAASVGDIESVKVLVEAKHVDVNSKNAVNQWTALHWASKRNQSAIVSYLLLHGADKSLPNKDGDSPVM LTSSTEIRNMLGGSGQTETRQSELPITPNYLANPPFPYTQPVVTNNPTSMIDQSRRETPAANGSNREEDGKSLHYDY |
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