Gene
| Gene Model ID | pfu_aug2.0_4692.1_09366 |
|---|---|
| Locus | scaffold4692.1 : 20576 ... 24496 : + |
| To GenomeBrowser | scaffold4692.1:20576..24496 |
| Genes list of scaffold | scaffold4692.1 |
| Synonym | pfu_aug1.0_5704.1_67299 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4692.1_09366.t1 | 2 | 1 | YqaJ | 207 | 226 | 1.6e-18 | 67.1 | 0.85 | 3100.0 | -2.1 |
| pfu_aug2.0_4692.1_09366.t1 | 2 | 2 | YqaJ | 272 | 426 | 1.6e-18 | 67.1 | 1.5e-21 | 5.6e-18 | 65.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4692.1_09366.t1 | gi|260787579|ref|XP_002588830.1| | hypothetical protein BRAFLDRAFT_89736 [Branchiostoma floridae] | 2.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_4692.1_09366.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4692.1_09366.t1 atgatggatgaggagaaattagaggagagtagatttggttacgaaggacagggtgaaatagatttagagattttgaaaga tgtccgatttcttctagacagagtggcattgaaaagtggaagtttgattggaaattttaccacaaatctcgccgaatcgt ggatgagcatcagatgcaagtttgatggagggaagacgaaaaatagatgtcagagggggtcgtggcctgcacgatgttat ggcggcggtctccgtaagaattttggagcagcatggtcacccatagtatggcacagatcaacaggcattacacctggaaa catctttactggtcattatcaccgtagagcacatgatctagagaacaacaagaagtacaagagaaagccagagaccaaaa ttaaaacagccaaaagaaaagcggaaagtgcatcaaaatgtaacagcaaaaaagctagaaaggaatatggaaatgactgt ttagatgggactccagatatttctcctgaagaactagcaactgctaaaacagagtacatagcatctgagataaatatttc ttcttcaagaattaaagaaatcgaaaaaacaactaaaagtcagtcattctcagcaacatggatcagacagaggaagaaaa gactaacatcatttaactttggagacgtcatcaggaaaaatgggactccagatatttctactgaagaactatcaactgct aaaacagagtacatagcatctgagataaatatttcttcttcaagaattaaagaaatcgaaaaaacaactaaaagtcagtc attctcagcaacatggatcagagagaggaagaaaagactaacatcatctaactttggagacgtcatcaggaaaagtacta cagcaaaagcagcaccctacatttcaagactcatgtattcaaagttctcagggaataagtacaccagaaaaggaattcag tctgagggagtgacaataaaggaatacacacgacttaaaagcaaggacgacatcacagtgacagttaagccttcaggtct gattatcgacgagaatcataagtttttagcagccagccctgatggtgtggtagaggaagatgagagtactggacttctag aaattaagaaccttcttcagaacaaccaggcatcatttgaggaagctgctagaaagagtacattttgtttagaatccaat aaaggaaaattgacacttaaacgcaatcataattattattaccagtgccaaggacaattaaacatatgtcaaatagaatg gctggatttcattgtaagacgcaccaatccatacgaaattcatgttgaaagaatttatagagacaaaaaattatgggatg acttcatggtgccaaagttgacagctttttatcataactgtatgctgccagagcttgcatccccgagaaagaacacattg caaggaataagagaaccttcaaaaccatggtacactccagctaactcttcatgccaggaaggaaatagaagacagaaaaa gaagaagcacttatccgatgacagcagtgattcagatgatgctagtccaaatattgtgccagaggtaagagctacaagca agagacagagacggaccaagtttgttggaagacaaatcttacatcagtggtgcacggatgagaccaagaatacattggaa tggtatgaggggactgtgctagattgtataagaggagttgatggcaacaaaaacgctgtatatgaggtcatgtacaaagg tgaaaatgaagcatatgaagtggacaatttacaggacgatttgaacaacggatccttgaaattcaaggacttgtag |
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Protein
| Protein ID | pfu_aug2.0_4692.1_09366.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4692.1_09366.t1 MMDEEKLEESRFGYEGQGEIDLEILKDVRFLLDRVALKSGSLIGNFTTNLAESWMSIRCKFDGGKTKNRCQRGSWPARCY GGGLRKNFGAAWSPIVWHRSTGITPGNIFTGHYHRRAHDLENNKKYKRKPETKIKTAKRKAESASKCNSKKARKEYGNDC LDGTPDISPEELATAKTEYIASEINISSSRIKEIEKTTKSQSFSATWIRQRKKRLTSFNFGDVIRKNGTPDISTEELSTA KTEYIASEINISSSRIKEIEKTTKSQSFSATWIRERKKRLTSSNFGDVIRKSTTAKAAPYISRLMYSKFSGNKYTRKGIQ SEGVTIKEYTRLKSKDDITVTVKPSGLIIDENHKFLAASPDGVVEEDESTGLLEIKNLLQNNQASFEEAARKSTFCLESN KGKLTLKRNHNYYYQCQGQLNICQIEWLDFIVRRTNPYEIHVERIYRDKKLWDDFMVPKLTAFYHNCMLPELASPRKNTL QGIREPSKPWYTPANSSCQEGNRRQKKKKHLSDDSSDSDDASPNIVPEVRATSKRQRRTKFVGRQILHQWCTDETKNTLE WYEGTVLDCIRGVDGNKNAVYEVMYKGENEAYEVDNLQDDLNNGSLKFKDL |
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