Gene
| Gene Model ID | pfu_aug2.0_4697.1_25975 |
|---|---|
| Locus | scaffold4697.1 : 15956 ... 22351 : + |
| To GenomeBrowser | scaffold4697.1:15956..22351 |
| Genes list of scaffold | scaffold4697.1 |
| Synonym | pfu_aug1.0_1343.1_36965 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| allograft inflammatory factor 1 | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4697.1_25975.t1 | 2 | 1 | EF-hand_7 | 18 | 37 | 4.6e-11 | 42.6 | 3.0 | 4000.0 | -2.0 |
| pfu_aug2.0_4697.1_25975.t1 | 2 | 2 | EF-hand_7 | 52 | 112 | 4.6e-11 | 42.6 | 3.4e-14 | 4.6e-11 | 42.6 |
| pfu_aug2.0_4697.1_25975.t1 | 2 | 1 | EF-hand_6 | 52 | 80 | 1.2e-08 | 34.1 | 6.0e-08 | 8.1e-05 | 22.1 |
| pfu_aug2.0_4697.1_25975.t1 | 2 | 1 | EF-hand_1 | 53 | 79 | 4.5e-13 | 47.4 | 7.9e-09 | 1.1e-05 | 24.4 |
| pfu_aug2.0_4697.1_25975.t1 | 2 | 1 | EF-hand_8 | 56 | 78 | 3.4e-09 | 36.1 | 3.4e-05 | 0.046 | 13.3 |
| pfu_aug2.0_4697.1_25975.t1 | 2 | 2 | EF-hand_8 | 71 | 114 | 3.4e-09 | 36.1 | 1.4e-10 | 1.9e-07 | 30.5 |
| pfu_aug2.0_4697.1_25975.t1 | 2 | 2 | EF-hand_1 | 87 | 112 | 4.5e-13 | 47.4 | 1.8e-08 | 2.4e-05 | 23.3 |
| pfu_aug2.0_4697.1_25975.t1 | 2 | 2 | EF-hand_6 | 88 | 112 | 1.2e-08 | 34.1 | 0.0007 | 0.94 | 9.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4697.1_25975.t1 | gi|465827695|gb|AGH28009.1| | 0.0 | |
| pfu_aug2.0_4697.1_25975.t1 | gi|260806002|ref|XP_002597874.1| | hypothetical protein BRAFLDRAFT_268299 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_4697.1_25975.t1 | gi|260789033|ref|XP_002589552.1| | hypothetical protein BRAFLDRAFT_81509 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_4697.1_25975.t1 | gi|340377793|ref|XP_003387413.1| | PREDICTED: allograft inflammatory factor 1-like [Amphimedon queenslandica] | 0.0 |
| pfu_aug2.0_4697.1_25975.t1 | gi|514701087|ref|XP_004998111.1| | allograft inflammatory factor 1 [Salpingoeca rosetta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4697.1_25975.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4697.1_25975.t1 atgcctgtagattttacagataaacaaggagggaagaaatatggacagctgcggaaggaacaagaagccatactagatga tatcaatcagacatttgcagacgacaaagactatgtggaggaatatgaagacttagcagataggttgcagagatataaag aacaatttatggaattcgacgaagacaattctggtgatattgacataatggaattaaagaggatgatggagaaactaggt caagctaagacccacctggaactgaagaagatgatagcggaagtagataccaccgactcgggtactattcattataacga gttcgtaggaatgatgttaggaaagaaatcttccgttctaaaattgatattaatgttcgaagaaaagaagaaagagaagg aaaagccaaaaggagttgctcctaaaaagagcttatctgatttgccttga |
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Protein
| Protein ID | pfu_aug2.0_4697.1_25975.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4697.1_25975.t1 MPVDFTDKQGGKKYGQLRKEQEAILDDINQTFADDKDYVEEYEDLADRLQRYKEQFMEFDEDNSGDIDIMELKRMMEKLG QAKTHLELKKMIAEVDTTDSGTIHYNEFVGMMLGKKSSVLKLILMFEEKKKEKEKPKGVAPKKSLSDLP |
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