Gene
| Gene Model ID | pfu_aug2.0_47.1_23319 |
|---|---|
| Locus | scaffold47.1 : 149016 ... 149674 : + |
| To GenomeBrowser | scaffold47.1:149016..149674 |
| Genes list of scaffold | scaffold47.1 |
| Synonym | pfu_aug1.0_10317.1_68175 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tumor susceptibility gene 101 protein | GO:0000813 GO:0001558 GO:0003714 GO:0005730 GO:0005769 GO:0005770 GO:0005886 GO:0006464 GO:0007050 GO:0008285 GO:0015031 GO:0030216 GO:0031625 GO:0042803 GO:0043162 GO:0045892 GO:0046755 GO:0048306 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_47.1_23319.t1 | 1 | 1 | UEV | 2 | 73 | 5.8e-23 | 80.8 | 6.1e-27 | 9.0e-23 | 80.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_47.1_23319.t1 | gi|350580241|ref|XP_003480770.1| | PREDICTED: tumor susceptibility gene 101 protein-like isoform X1 [Sus scrofa] | 1.0e-23 |
| pfu_aug2.0_47.1_23319.t1 | gi|675866254|ref|XP_009018687.1| | hypothetical protein HELRODRAFT_185660 [Helobdella robusta] | 1.0e-23 |
| pfu_aug2.0_47.1_23319.t1 | gi|676461646|ref|XP_009056010.1| | hypothetical protein LOTGIDRAFT_119455, partial [Lottia gigantea] | 3.0e-23 |
| pfu_aug2.0_47.1_23319.t1 | gi|524881077|ref|XP_005097194.1| | PREDICTED: tumor susceptibility gene 101 protein-like [Aplysia californica] | 8.0e-23 |
| pfu_aug2.0_47.1_23319.t1 | gi|532029897|ref|XP_005357897.1| | PREDICTED: tumor susceptibility gene 101 protein isoform X2 [Microtus ochrogaster] | 1.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_47.1_23319.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_47.1_23319.t1 atgtataaagggaacacgtacaacatccctatatgtatatggatactaaacacacatccttataatcccccaatggtctt cgtcaaacccacgagcaatatgcaaataagacaaggacgcaatgttgatgccaacggaaaagtagacttaccatatttac tggactggagatatgtaagtcgccattgtagactagaaaagaaaggagaggatctccaacaacactcggttgcagcaccc acagcaaaaccccaaaacacccaatgcaaaaaacacccacagaaagagacgcaaaaaggaacaaggaacacctactcaca ccatagaaacattaacataaaaaaccaacgagaccaatgggcaaccggtgccgacttaggaaggccatctgccacgttaa tagcagacggtgtggttatcctggattacgtgcgcacaaccgatccactattccgatttcccagtggtctcgaataa |
|
Protein
| Protein ID | pfu_aug2.0_47.1_23319.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_47.1_23319.t1 MYKGNTYNIPICIWILNTHPYNPPMVFVKPTSNMQIRQGRNVDANGKVDLPYLLDWRYVSRHCRLEKKGEDLQQHSVAAP TAKPQNTQCKKHPQKETQKGTRNTYSHHRNINIKNQRDQWATGADLGRPSATLIADGVVILDYVRTTDPLFRFPSGLE |
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